Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0086 |
Symbol | |
ID | 3960087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 86684 |
End bp | 88093 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637914924 |
Product | peptidase M24 |
Protein accession | YP_521378 |
Protein GI | 89898907 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.875137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAA CACCTCTGGC GAAAACTGCC GACACGGGCT ACGCCCAGCG TCGCGCGCAA GTGGCCAAAC TCATCGGCCC GCACGGCATC GCCATCATCC CGACTGCGCC CGAGCAGCAG CGCAACCGCG ACAACGATTT TTTGTTCCGC CCCGACAGTT ACTTTTACTA CCTGACCGGT TTCACCGAAC CCAAGGCCTG GCTGGTCATC ACCGGCGACG GCAAGACGAG CTTGTTTTGC CAGGCTAAAG ACCAGGAGCG CGAAATCTGG GACGGTTACC GGCTCGGGCC GCAGGCCGCA CCGGCAGCGC TCGGGGTCGA CGCGGCATTT GCCGTTGCGG ACCTGGACGC CCAACTGCCC GGCCTGCTCG ATGGCCGTGA TGCCGTCTGG TACCCGTTTG CCACCCACAA GGGGCTGGAA ACGCGCATTG ACGGCTGGCT CGGCAGCGTG CGGGCCCGCG TGCGTTACGG CACGTTGTGC CCCGAGCAGC AGCGTGACCT GTGTGGTTTG CTCGATGAAA TGCGCCTGGT GAAAGACGCG CACGAGCAGG CCACCATGCG CCGCGCCGCT CAAATCAGCG CGGGCGCCCA CATTCGCGCC ATGCAGCTCA GTGCCCGCAT GCTGCGGGGT GGGCAGGAGG TGCGTGAATA CCACCTGGAC GCCGAACTGC TGCACGAGTT TCGCCGCCAT GGCTCGCAGT CCCCGGCGTA CGGCTCCATC GTGGCCGCCG GCGCCAATGC CTGTGTATTG CACTACCGCG CCGACGCGGG ACAAGTGCGC GCTGGTGAAT TGGTGCTGAT CGACGCCGCC TGCGAGCTCG ACGGCTACGC CAGTGACATC ACCCGCACCT TCCCGGCCAA CGGCAAGTTC AGCGGGCCGC AGCGCGCGCT GTATGAACTG GTGCTGGCAG CGCAAGAGGC AGCCGTTGCC GCCACCCGCG CCGGTGCCCG CTTCACCGAT CCGCACGAGG CCAGCGTCAA GGTACTCGCG CAAGGGATGC TGGACCTGGG GCTGCTCGAG CGCAACAAGG TCGGCAGCCT GGAGGATGTG ATCGATAAGC GCGCCTACTT TCAGTTCTAT ATGCACCGCA CCGGGCATTG GATCGGCATG GATGTGCACG ATTGCGGCGC CTATACCGAG CCCTCGGAAA TTGGCCAGGT CAGCACGCGC AAGGACGCAC TCACCGGTGA CCTCATCAAA GACCGGCCAG CCCGCATCCT GCAGCCCGGC ATGGTGCTGA CGATCGAGCC CGGCATTTAT GTGCGTCCGG CAGCGGGTGT GCCCGCGCAG TTTCACAACA TCGGCATCCG CATTGAAGAC GACGCCATCG TCACCGCCAG CGGCTGCGAG CTGATCAGCC GCGGTGTGCC GGTGCAAGCC GATGACATTG AGGCGCTGAT GCGGGGCTGA
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Protein sequence | MTATPLAKTA DTGYAQRRAQ VAKLIGPHGI AIIPTAPEQQ RNRDNDFLFR PDSYFYYLTG FTEPKAWLVI TGDGKTSLFC QAKDQEREIW DGYRLGPQAA PAALGVDAAF AVADLDAQLP GLLDGRDAVW YPFATHKGLE TRIDGWLGSV RARVRYGTLC PEQQRDLCGL LDEMRLVKDA HEQATMRRAA QISAGAHIRA MQLSARMLRG GQEVREYHLD AELLHEFRRH GSQSPAYGSI VAAGANACVL HYRADAGQVR AGELVLIDAA CELDGYASDI TRTFPANGKF SGPQRALYEL VLAAQEAAVA ATRAGARFTD PHEASVKVLA QGMLDLGLLE RNKVGSLEDV IDKRAYFQFY MHRTGHWIGM DVHDCGAYTE PSEIGQVSTR KDALTGDLIK DRPARILQPG MVLTIEPGIY VRPAAGVPAQ FHNIGIRIED DAIVTASGCE LISRGVPVQA DDIEALMRG
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