| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0085 |
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| Symbol | |
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| ID | 3960086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 85846 |
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| End bp | 86664 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637914923 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_521377 |
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| Protein GI | 89898906 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.420165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCTGG CGGCCGGCCG CGGCGAGCGT ATGCGGCCCC TGACCGATAC CACGCCGAAA
CCTTTGCTGC CCGTGCGCGG CAAGCCGCTG ATGCAGTGGC AGCTGGAGGC GCTGGCGCGC
GCGGGTGTGG GCCGGGTGGT GGTCAACACG GCTTGGCTGG GGCCGCAGAT TGCCGCTCAA
TTTAATGATG TTTTCAGGCT CCAGCCCGCG TCAAATAAGC ATGAGCAGCT ATCAATTCAG
GATAGTCTGC AGATTCGATA TTCCCATGAG GGCCAGGATT TTGGCGCCGC ACTGGAAACC
GCCGGGGGCA TTGCCCGCGC CTTGCCGTTG CTGTGCCCGC CCACCGGCGC CGGGGCCCGC
GCTGAGGTGT TCTGGGTGCT CGCCGGTGAC GTGTATGTGC CTGACTTTGT CTTCAGTCCG
GCGGCGGTGG CGCGCTTTTT AGCTGGTGAC AAGCTGGCGC ACCTGTGGCT GGTGCCCAAC
CCGGCGCACA ACCTGCGCGG CGACTTTGGA CTGGGCACCG TTGACACGGG TGGGCCAACG
CCGGTCGGCC TGGCGCTTAA TCTGCCCGCC GCTGATCCAC GCCCGCGTTA CACCTATTCC
ACCATCGGAC TCTATCGCCG CGCCTTGTTT GAATCACCCT GGTGTGACAT CGCCGCCGGC
AATCCGCTGG GCATCAAAGC CCCTTTGGCG CCGCTGTTGC GCGCGGCCAT GGACAATGGA
TTCGTGTCTG CCGAACTGTA CGGCGGCCGC TGGACCGACG TTGGCACACC CGAGCGCCTG
CGCGCCTTGA ATTTGAACCC GCCCTCTGCC CAACCTTGA
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| Protein sequence | MLLAAGRGER MRPLTDTTPK PLLPVRGKPL MQWQLEALAR AGVGRVVVNT AWLGPQIAAQ
FNDVFRLQPA SNKHEQLSIQ DSLQIRYSHE GQDFGAALET AGGIARALPL LCPPTGAGAR
AEVFWVLAGD VYVPDFVFSP AAVARFLAGD KLAHLWLVPN PAHNLRGDFG LGTVDTGGPT
PVGLALNLPA ADPRPRYTYS TIGLYRRALF ESPWCDIAAG NPLGIKAPLA PLLRAAMDNG
FVSAELYGGR WTDVGTPERL RALNLNPPSA QP
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