| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0058 |
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| Symbol | |
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| ID | 3960313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 60804 |
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| End bp | 61241 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637914897 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_521351 |
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| Protein GI | 89898880 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.393003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTCAA CAATTCGGCA GCGTACGCTG CTCGGCTGTG CCGCGCTGAT CACCGGGTTT
GTGATTTGGT CAGCGCAAGG GGCTGCGCCA AATACCCTGA TCGCGCTAGG CGATCAACAA
TGGGCCGCGG GGCAACTTGA ACTGGCGCAG AAGACCTTTG AACACGCAGT CAAAGCAGAG
CCCCGCTCGG TCGACGCGCA TATGAAGCTG GCTGGTTTGC AGCTTTCCCG CCAGGAATTC
AAGGCCTGCA TCGAGACCTA CCAGCGAGCA ATCGGGCTCG ATGCAAACAA TGCCAGAGCC
TGGCTGGGCT TGGGATTCGC GTATCTTCAC ACCGGTCAAA ATGACTTATC ACTGGCCGCT
TTGGACGAGG CCATTCGCAT CGATCCCGGC AACCAGGAAA AATTGGCCCC GGTGCTGGCG
AAGCTGGGCA CGCCTTGA
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| Protein sequence | MYSTIRQRTL LGCAALITGF VIWSAQGAAP NTLIALGDQQ WAAGQLELAQ KTFEHAVKAE
PRSVDAHMKL AGLQLSRQEF KACIETYQRA IGLDANNARA WLGLGFAYLH TGQNDLSLAA
LDEAIRIDPG NQEKLAPVLA KLGTP
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