Gene Rfer_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0052 
Symbol 
ID3960307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp55517 
End bp56152 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content67% 
IMG OID637914891 
Producthypothetical protein 
Protein accessionYP_521345 
Protein GI89898874 
COG category[R] General function prediction only 
COG ID[COG3545] Predicted esterase of the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.646414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACCC ATGACCTGCC GACTCCGCAA GTTTTGCTGC TCCCCGGCTG GCAAAATGCG 
GGCCCCGCAC ACTGGCTGAG CCGGTGGCAG GCGGCGCACG GCTATCGGCG CGTGGAACAG 
CACGACTGGT TGCGCCCGTT GCGCGGCGAC TGGTTGATGC AGCTTGAAGA AGCGGTGCTG 
CGGTCAAAGT CGGCGCCAGG GCCGGGTTTG ACGCTGGTCG CCCACGGCCT GGGCTGCCTG 
CTGGTGGCGG CGTGGGCCAC GCACTCGCGC CACACCCACC TGGTGAAAGC GGCGCTGCTG 
GTGGCGCCGA CCGATGTCGA GCGCGAAGCC TTGCGGGCGC TGCTGGCGAG TTGGTCACCG 
ATCCCCTGGC AGCCCCTGCC GTTCAGCAGC ATGCTGCTTG GCAGCCGTGA CGATCCTGAT 
TGCAGTTTCG AGCGCGCGCA GGCGTTCGCT CACGCCTGGG GGGCTGAGTT CATCGACGGC 
GGTCCGCACG GGCAGATCAA CGCTGAGTCG GGTCTGGGCG ATTGGCCGCA AGGGCATGCT 
TTGTTGCAGT TGGTAGAGGG CAGAACGCAA GGTCTGTCCC AGGTGAAAAC AGGCGAGTCA 
AGTGCCGGGC TGACGGTCTG CGCCGCCCAC TATTAA
 
Protein sequence
MMTHDLPTPQ VLLLPGWQNA GPAHWLSRWQ AAHGYRRVEQ HDWLRPLRGD WLMQLEEAVL 
RSKSAPGPGL TLVAHGLGCL LVAAWATHSR HTHLVKAALL VAPTDVEREA LRALLASWSP 
IPWQPLPFSS MLLGSRDDPD CSFERAQAFA HAWGAEFIDG GPHGQINAES GLGDWPQGHA 
LLQLVEGRTQ GLSQVKTGES SAGLTVCAAH Y