Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0045 |
Symbol | |
ID | 3960300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 47742 |
End bp | 48374 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637914884 |
Product | heme exporter protein CcmA |
Protein accession | YP_521338 |
Protein GI | 89898867 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAACTG TTCCGACCCT GTCCTTTTCC AAGCTCGGCT GCAGCCGGGG CGGTCGGCAA CTCTTTCAGA ATATTGACTG CGTCCTGGAA TCCGGGCACT GGCTTTATGT GGCCGGGGCC AACGGTGTCG GCAAAACCAG CCTGCTGCGC ATGGTGTGCG GTCTGGCGCC GATCGAATCC GGTGAAATTT TCTGGAATGG CACCCCCATT CATGCCCAGG CCGATGCCTA CCGGCAAGAC CTGTGCTACC TGGGTCACCT CAATGCCCTG CAGGAATCCA TGACCGTGCA CGAGAACCTG GCGTTCACTG CGGCGCTGGG CGGCATGGCC CCAGACATGG CGCAAACGCA GTCGGTTCTG GCGCATTTTG GCGTTGCCGG TCGCGACCGC CAGTTGGTGC GCCATCTGTC GCAAGGTCAA AAGCGGCGCG TCGCCCTGTC CCGACTTGCT TTGAGCCAGG CCCGTTTGTG GGTGCTGGAT GAGCCTTTTG TCGCCATGGA CGAGGCCGGG GTGCGCATGT TGGCCGACCT GATCGCAGCG CATTTGACCC AAGGCGGCTT GGCGGTACTG ACCAGCCACC AACAGGTGGA CATCGGCGCC ATACCGGCCC AACTGCTGGA GCTGCGCGCA TGA
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Protein sequence | MKTVPTLSFS KLGCSRGGRQ LFQNIDCVLE SGHWLYVAGA NGVGKTSLLR MVCGLAPIES GEIFWNGTPI HAQADAYRQD LCYLGHLNAL QESMTVHENL AFTAALGGMA PDMAQTQSVL AHFGVAGRDR QLVRHLSQGQ KRRVALSRLA LSQARLWVLD EPFVAMDEAG VRMLADLIAA HLTQGGLAVL TSHQQVDIGA IPAQLLELRA
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