Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0032 |
Symbol | |
ID | 3960461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 36476 |
End bp | 38110 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637914871 |
Product | N-6 DNA methylase |
Protein accession | YP_521325 |
Protein GI | 89898854 |
COG category | [V] Defense mechanisms |
COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.885751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGACG AAGAACAACA ATATCTCAAC AACCTTGACA AGCAACTCTG GGCCGCCGCC GACCGCCTGC GTGCCGCCGT CAACCCCAGC GAATACATGC ACGTCGTCTT GGGGTTGGTG TTCCTCAAGT ACATCTCCGA CGCCTTCAAG GAACGCCGCC TTGAGCTGCA AGCCGCCTTC CAAGACCCCG CCAACGACTA TTACCTGGGC ACTGATGCGG ATGAGCTAAT TGCGCAAGAG CTGGAAGCGC GCGATTACTA CACCGAGACC AACGTCTTCT GGGTGCCCGC CCTGGCCCGC TGGGACTTTC TCAAAGACAA CGCCAAGGTC GCCATCGACA CCGTGCTCAC CGTCAAAAAC GGCAAAACCT TTGAATACAA GTTCAAAGGC ATCGGCCGCC TGCTGGACGA CGCGTTGGAG GCGGTGGAAA AGGACAACCC CAAGCTCAAA GGCGTGCTCG ACAAAAGCTA TGCCCGCTGG CGCGTGGACG AAGCCTTGCC CGGCCTGATT GACGAGTTTT CCAAAATCCC GTTCAACCAC GGCGCGCTCA AGGCCAAGGA CATCTTGGGC CACATCTACG AATACTTTTT GGGTGAGTTC TCCATTGCCG CAGGCAAACG CGGCGGCGAG TTCTACACCC CCAAAAGCAT CGTCAGCGTC ATTGTGGAAA TGCTGGAGCC GTTTGAAGGT CGCGTCTACG ATCCGTGCTG TGGCTCGGGC GGCTTCTTTG TGCAAAGCGA GCGTTTTGTG CTGGAGCACG GAGGCAAGAT CGGCCAGCTC AGCATCTACG GCCAAGAGTT CAACCCCACC ACCTGGCGCC TGGCCAGCAT GAACATGGCC ATTCGCGGGC TGGACTTTGA CTTTGGCAAA GAGCCCGCCA GCACCTACAC CCGCCCCCAG CACCCCGATC TGCGCGCCGA CTTCATCATG GCCAACCCGC CCTTCAACAT GAAGGCCTGG AAAGAAGGCG TGAAAGACGA CGATCCGCGC TGGAAGTATG GCGTGCCGCC CGACGGCAAC GCCAACTTTG CGTGGATGCA GCACATGATC CACCACCTGG CCCCCCACGG CAGCATGGCC CTGCTGCTGG CCAATGGCTC CATGAGCAGT AACACCAATA ACGAGGGCGA GATTCGCAAA GCCTTAATCG AGGCTGACCT CGTGGAATGC ATGGTGGCGC TGCCCGGACA GCTATTCACC AACACGCAAA TCCCCGCCTG CATCTGGTTC CTTACGCGTA GCAAGGCCGA GCGCAAAGCC AAACGCAGCC GCCATGGCGA AGTGCTGTTC ATCGATGCCC GCCAACTGGG CTACATGAAA GACCGCGTGC TGCGCGACTT CAAACCCGAA GACTTGGCCA AAGTCGCCGA CACCTTCCAC GCCTGGCAGC GCGGCGTGGG CTATGCCGAC GAAGCAGGGT TTTGCAAGGC CGCCACACTG GCGGACATCG GCAAGGCGGA CTACGTGCTC ACACCCGGCC GTTATGTGGG TGCCGCCGCA CAAGAAGCGG ACGCCGAACC CTTTGAGGAC AAGATGGCCC GCTTGACCGC TGCCTTAGGC GACCAGTTTA AGGAAAGCGC TCGCCTGGAG GCAGCCATTC GAAAAAACCT GGCGGGGCTG GGTTATGAAG TTTGA
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Protein sequence | MNDEEQQYLN NLDKQLWAAA DRLRAAVNPS EYMHVVLGLV FLKYISDAFK ERRLELQAAF QDPANDYYLG TDADELIAQE LEARDYYTET NVFWVPALAR WDFLKDNAKV AIDTVLTVKN GKTFEYKFKG IGRLLDDALE AVEKDNPKLK GVLDKSYARW RVDEALPGLI DEFSKIPFNH GALKAKDILG HIYEYFLGEF SIAAGKRGGE FYTPKSIVSV IVEMLEPFEG RVYDPCCGSG GFFVQSERFV LEHGGKIGQL SIYGQEFNPT TWRLASMNMA IRGLDFDFGK EPASTYTRPQ HPDLRADFIM ANPPFNMKAW KEGVKDDDPR WKYGVPPDGN ANFAWMQHMI HHLAPHGSMA LLLANGSMSS NTNNEGEIRK ALIEADLVEC MVALPGQLFT NTQIPACIWF LTRSKAERKA KRSRHGEVLF IDARQLGYMK DRVLRDFKPE DLAKVADTFH AWQRGVGYAD EAGFCKAATL ADIGKADYVL TPGRYVGAAA QEADAEPFED KMARLTAALG DQFKESARLE AAIRKNLAGL GYEV
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