Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0018 |
Symbol | |
ID | 3960254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 20653 |
End bp | 21687 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637914857 |
Product | zinc-binding alcohol dehydrogenase |
Protein accession | YP_521311 |
Protein GI | 89898840 |
COG category | [R] General function prediction only |
COG ID | [COG2130] Putative NADP-dependent oxidoreductases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACAAA CCACCACTTT GAATCGCCAG GTCCAACTGG CCGCGCGCCC GGTCGGTACG CCCACCGCCG CCGACTTTCA CCTTGCGACC ACGGCCGTGC CCGTCGCCGG ACCGGGCCAG CTGCTGCTGC GCACCGTGTA TCTGTCGCTG GACCCCTATA TGCGGGGCCG CATGAGCGAC GCCGCCAGCT ACGCCGCCTC GGTTGCCATC GGCGCCACCA TGGTGGGTGC CACCGTGTGC CGCGTACAAA GCAGCCAGCA CGCCGGTTTC GCCGTCGGCG ACTGGGTGCT GGCCTATACC GGCTGGCAGG ACTACGCGCT GTCCGATGGC ACCGGCCTGA CCAAGCTGGA CCCAGGCCTG GCACGCCCGT CCTACGCCCT GGGCGTGCTG GGCATGCCCG GTTTCACCGC CTACATGGGG CTGCTGGACA TTGGCGCGCC CAAGGCCGGT GAAACGGTGG TGGTGGCCGC GGCCACCGGC GCGGTCGGCT CCGTGGTCGG GCAGATCGCC AAGCTCAAGG GCTGCCGCGT GGTGGGTATT GCCGGCGGTG CCGACAAGTG CCGCTCGGCC GTGCAAGAAC TGGGCTTTGA CGCCTGCATT GACCATCACA ACCCCGATCT GGCGGCGCTG CTGGCAGCCG CCTGCCCCAA GGGCATTGAC GTGTATTTTG AAAACGTCGG CGGCAAGGTG TTCGACGCCG TGCTGCCGCT GCTCAACACC GCAGCCCGTG TGCCGGTGTG CGGCCTGATT GCGCAGTACA ACGCCACCGC GCTGCCCGAA GGCCCGGACC GCAGCCCGCT GCTGATGCGC ACCCTGCTGA CCAAGCGCAT CCGCATGCAG GGTTTCATCA TTTTTGACGA CTACGGCCAT CGCTACCCCG AGTTCGCCAA AGACATGAGC CAGTGGCTCG CCAACGGGCA GATCAAGTTC CGCGAAGACA TCGTCAACGG CCTGGAGAAC GCGCCGCAGG CCTTCATCGG CCTGCTCGAA GGCAAGAACT TCGGCAAGCT GATCGTGCGC GTCGCCAACG ACTAA
|
Protein sequence | MTQTTTLNRQ VQLAARPVGT PTAADFHLAT TAVPVAGPGQ LLLRTVYLSL DPYMRGRMSD AASYAASVAI GATMVGATVC RVQSSQHAGF AVGDWVLAYT GWQDYALSDG TGLTKLDPGL ARPSYALGVL GMPGFTAYMG LLDIGAPKAG ETVVVAAATG AVGSVVGQIA KLKGCRVVGI AGGADKCRSA VQELGFDACI DHHNPDLAAL LAAACPKGID VYFENVGGKV FDAVLPLLNT AARVPVCGLI AQYNATALPE GPDRSPLLMR TLLTKRIRMQ GFIIFDDYGH RYPEFAKDMS QWLANGQIKF REDIVNGLEN APQAFIGLLE GKNFGKLIVR VAND
|
| |