Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0006 |
Symbol | |
ID | 3960242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 7888 |
End bp | 8466 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637914845 |
Product | NnrU |
Protein accession | YP_521299 |
Protein GI | 89898828 |
COG category | [S] Function unknown |
COG ID | [COG4094] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.23902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCTATC TCATTCTCGG ACTCATTGTT TTCCTGGGTG TGCACTCGGT GCGTATCGTG GCCGATGACT GGCGCACCCA AACCAGAGCG CGCATCGGCC CGCTGGCCTG GAAGGGCTTG TACTCGGTTC TCTCCCTGCT TGGTTTCGCG CTGATCGTAT GGGGCTTTGG CCTGGCGCGC CAGCAGCCGG TGCAGTTGTG GAGTCCACCG GTAGCGCTGC GGCACCTGGC CTCACTTTTG ACCCTGCTTT CGTTCGTGCT GCTGGCGGCG GCCTACGTGC CAGGCAACAT CATCAAGGAA CGCATTCACC ATCCCATGGT GCTCGGTGTC AAGCTGTGGG CGCTGGCGCA TTTGCTGGCC AATGGCAACC TCGGCCATGT GGTGTTGTTT GGCTCATTCC TGGCCTGGGC AATCGTCGAT TTCACCGCGT CACGGCGGCG CGACCGCACA CTCGGCACGC GCTACCCCGG CGGCACCGCG GGTGCCACCG GCATCACGGT GGCACTGGGC GTGGGCGCAT GGATTGCGTT TGCGCTCTGG CTGCATGGCC TGCTGATCGG TGTGCGACCA CTGGGCTGA
|
Protein sequence | MTYLILGLIV FLGVHSVRIV ADDWRTQTRA RIGPLAWKGL YSVLSLLGFA LIVWGFGLAR QQPVQLWSPP VALRHLASLL TLLSFVLLAA AYVPGNIIKE RIHHPMVLGV KLWALAHLLA NGNLGHVVLF GSFLAWAIVD FTASRRRDRT LGTRYPGGTA GATGITVALG VGAWIAFALW LHGLLIGVRP LG
|
| |