| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C6204 |
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| Symbol | |
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| ID | 3607831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007336 |
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| Strand | + |
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| Start bp | 362271 |
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| End bp | 363743 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637689075 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_293372 |
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| Protein GI | 72384018 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0651418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACTC AGAAATTCCG CCGAGCACGC CACTTCGCCG CGCCTACCGT CTTCATACTG
ATGGCAGCTG TGCTAGCCGG CTGCGCCAAC TATGCCGGCA TCAAGAGCGA CAGGAACATT
GCCAATGCCA GCAGCTACGC CACCACGGAG AGCATTCCTG CCGAGCACGG CCGCTGGCCC
TCCACCGATT GGGCAGACCA GTTTGGGGAT GCACAACTCA AGACGCTGAT CGGTGAAGCC
CTGCAGGGTA GTCCATCGCT CGAAAAGGCG CGGGCGCGTG TGGCCGCCGC TACGGCGTTC
AGCGAGGGCG CCAATGCCAA CACGCTGCCG CAAGTCGGGG CGGGCTATTC GTGGACCCGC
CAGCGTTTTT CGGAAAGCAC GCTGATCCCG CCCCCCTTCG CCGGTTCCTG GCAGTCGGAA
AACAAGGCTT TCATCAACGC CTCGTATGAA CTGGACCTAT GGGGCAAGAA CCGCGAGACG
CTCAAGTCCG CCGTGTCTTC CCTCCACGCC AGCGAGGCCG AGGCGGAACA GGTAAGGCTG
ACGCTCAGCA GTGCAATTGC CCGTGCCTAT AACGAACTGG CGCGCCTCTA CGCACTGCAT
GACATCGCGC AGGATGAAGT CAAGCAGCGC GGCGAAGCGC TGCGCGTGAC CGACGGACGC
GTCACCATGG GCCTCGACAC CGAGGTCGAG AAGCGCACCG CGGAGGCGAA CCTCGCTGCC
AGCGAAGTTG CGCTGTCCTC GCTCGACGGC AGCATCCAGC GCACGCGTTA CCAGCTTGGC
GCACTGCTGG GGCGGGGCCC GGACCGCGGC CTGGCGATCG CCCGTCCTGC CTTGGGCGCG
GGAGACGAAA TCCGCCTGCC CGACAACCTG CCGGCCGACC TGGTTTCGCG CCGACCGGAT
ATCGTCGCCG CGCGCTGGCG CGTCGACGCG ACGCTGCATG ACATCAAGGT CGCCAAGGCC
GAGTTCTATC CGGACATCAA CCTGAGCGCC ATGATCGGTG TCGATGCCTT TGGCTGGGGC
CGCTTCCTGC GCGCCGCCAG CCGCACCGCC TCGGCTGGTC CTGCGATCCA CTTGCCGATC
TTCGACGGCG GCGCGCTGCG CGCCCAACTC AAAGGCCGCT ATGCCGAATT CGACTTCGCC
GTGGCCAGTT ACAACGAGTC GCTGACCAAT GCCCTGACCG ATGTTGCCAT CCAGCTCTCC
GACATTCGCG CCATCGACGC ACAGATCGGC AATGCCGTAC GCACCGATAC CGCCGCGCAG
CGCGCGCTGA CCCTGGCGCT GGCGCAATAC AAGGCCGGCC TGACCACCCA GCTGACGGTG
CTGAACGCGC AGACGAGTGC GCTGGCCAGC CGCCAGTTGC TCGCCAACCT GCGCATGACG
CGCCGTGACC GACAGATCGC CCTGGCCGCT GCGCTGGGTG GCGGCTATAC GGACACCTCC
GACCCGACCA AACCAACGGC GCTTGTCCGC TGA
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| Protein sequence | MQTQKFRRAR HFAAPTVFIL MAAVLAGCAN YAGIKSDRNI ANASSYATTE SIPAEHGRWP
STDWADQFGD AQLKTLIGEA LQGSPSLEKA RARVAAATAF SEGANANTLP QVGAGYSWTR
QRFSESTLIP PPFAGSWQSE NKAFINASYE LDLWGKNRET LKSAVSSLHA SEAEAEQVRL
TLSSAIARAY NELARLYALH DIAQDEVKQR GEALRVTDGR VTMGLDTEVE KRTAEANLAA
SEVALSSLDG SIQRTRYQLG ALLGRGPDRG LAIARPALGA GDEIRLPDNL PADLVSRRPD
IVAARWRVDA TLHDIKVAKA EFYPDINLSA MIGVDAFGWG RFLRAASRTA SAGPAIHLPI
FDGGALRAQL KGRYAEFDFA VASYNESLTN ALTDVAIQLS DIRAIDAQIG NAVRTDTAAQ
RALTLALAQY KAGLTTQLTV LNAQTSALAS RQLLANLRMT RRDRQIALAA ALGGGYTDTS
DPTKPTALVR
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