| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C6056 |
|---|
| Symbol | |
|---|
| ID | 3607440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007336 |
|---|
| Strand | - |
|---|
| Start bp | 192804 |
|---|
| End bp | 194351 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637688942 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_293239 |
|---|
| Protein GI | 72383885 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCATC CATCGCACTA CGCACAGACC ATGCCTAAGA AGATTGCGGC GGTCTTCATA
CCTAGCGGGC GCGAAATCAC GTATCTCCAA CTGGAAGAGG GGGCCAATCG GGTTGCCAAT
CTTCTCCGCA GTGCCGGGAT CAAGACCGGA GACGCTGTGC TCTTCTGCGT CGAGAATTGC
CCCGAGTTCC TGTATTTGGG ATGGGGGTGC CAGCGCGCTG GCGTCGTTTT TACGCCGGCG
TCAACCAAGT TAAGCGCCGA CGACCTGCGC TATATCGCGC GCGATTGCGG AGCGCGCGCT
GTGTTCGTTT CAGTGGCCGC CGTCAACAGC GCCGGTCTCT TAGCGGCCGA TTTTGGTTCC
GCAGCATGTT TCGCCCTTGG GGGCGATATT CCCGGTTTTG AGCGACTCGA GGACGCGCTT
CGTGCATGCC CCGTGACATC AATCCATGAT CCGGCTCGCG GCAGGGAGAT GATGTACTCG
TCCGGGACCA CCGGCCGGCC AAAAGGTGTG CGCAAGCCGA TTCCTCCCAT ATCGTTCCAT
GACATGGACC CGCGCGATGC TTCGTTCGCC AGCAAGCCGG GCGTCGATAC GTCCATGGTC
TATCTCTGCA CATCACCTCT GTATCATGCC GCGCCGCACC GAAACGTCTC GGCGACCCTG
GCCTTCGGCG GTACCGCTGT GGTAATGGAA CACTTTGATG CAGTTCAGGC GCTCCATGCC
ATGGAAAAAT TCCGGGTTAC CCACAGCTTA TGGGTTCCGA CGATGTTCCA TCGATTGCTG
CGCCTTGATG CGGGCCTGCG CATGCAGTTT GACCTTTCCA GTCATCGCTT AGCGATGCAC
GGCGCCGCAC CTTGCCCCAT TCATATCAAA GAGACAATGA TCGAATGGTG GGGGCCAATC
CTGGAGGAAT ATTACGCGGG AACAGAAGGG ATCGGCGCCT GTTCGATCAG TTCGCTTGAA
TGGCTCGCTC ACAAGGGATC AGTGGGTCGA GCCGTCGAAG GAATCGTTCA TATCCTTGCC
GACGATGAGA ACGAAGTAGC TTCTGGCTCG ACAGGAACGG TGTACTTTGA GTCGGACGCC
AAGTTTGCAT ACTGGAACGA TACCGGAAAA ACTGCGGCGA GCCGAAGCAA ACAGGGGTGG
TGGACCTACG GTGATATAGG CCATCTCGAC GAAGAGGGAT ACTTATACCT CTCGGACCGC
CGCGATTTTA CGATCATATC CGGCGGTGTG AACATCTATC CACAAGAGAT AGAGAACATT
CTTGTAACCG ATGAGCGCGT GCTCGACGTG GCTGTCTTCG GCCTGCCCGA TGACGAGTAC
GGGGAAGCGG TCCACGCAGT GGTTCAGGTC GAGCGGCAAC CAGGCGCCCC TCACGCGTTA
GCTGAGGAGT TGAGGGCCCT TTGTCGCAGC AAGCTCGGTG CGCTACGGGT TCCGCGGTCC
TTCTCGTTTG TGCTCGAATT TCCGCGCCTG CCCACGGGAA AGCTTCAGAA GAAGCTGTTG
CGGGACACAT TAATTCGCTC GATGCAACCT TCGTCCGTGG GCAATTGA
|
|---|
| Protein sequence | MAHPSHYAQT MPKKIAAVFI PSGREITYLQ LEEGANRVAN LLRSAGIKTG DAVLFCVENC
PEFLYLGWGC QRAGVVFTPA STKLSADDLR YIARDCGARA VFVSVAAVNS AGLLAADFGS
AACFALGGDI PGFERLEDAL RACPVTSIHD PARGREMMYS SGTTGRPKGV RKPIPPISFH
DMDPRDASFA SKPGVDTSMV YLCTSPLYHA APHRNVSATL AFGGTAVVME HFDAVQALHA
MEKFRVTHSL WVPTMFHRLL RLDAGLRMQF DLSSHRLAMH GAAPCPIHIK ETMIEWWGPI
LEEYYAGTEG IGACSISSLE WLAHKGSVGR AVEGIVHILA DDENEVASGS TGTVYFESDA
KFAYWNDTGK TAASRSKQGW WTYGDIGHLD EEGYLYLSDR RDFTIISGGV NIYPQEIENI
LVTDERVLDV AVFGLPDDEY GEAVHAVVQV ERQPGAPHAL AEELRALCRS KLGALRVPRS
FSFVLEFPRL PTGKLQKKLL RDTLIRSMQP SSVGN
|
|---|
| |