| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C6026 |
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| Symbol | |
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| ID | 3607488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007336 |
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| Strand | + |
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| Start bp | 155890 |
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| End bp | 159219 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637688916 |
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| Product | periplasmic sensor diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_293213 |
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| Protein GI | 72383859 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.178921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCCAGA CGCTTGCGCG CATGCTGCGC CCGTTTGGGC GTCTTGGGTC GTGCACCATC
ACGGCGGGCA CCTTGCTGCT TGGCGTGATG ACGACGGCCT TCGTCTTTGT CTTCTGCACC
AATCTGCTGG AAAAGGACGT CCGTCTGCGT TTTGAGAACG ATACTGGCGA CGTGATCCAG
CAAATCGATA CTCGGATCCG CCTCTATACC GACGTACTGG TCACCATGCA GGCGCTGTTT
GGCGCCAGTG AACATGTCTC GCGTGGCGAG TTTCGCGATT TCGTCAGCGG GCTGAACCTG
CCACAACGCT ATCCTGGTTT CCAGACGCTG AACTACGCGC CGTATGTACC GGCCGACGAA
CTCGATGCCT TCGTGGCCCG TCAGCGCAGC GACCCCATCC TGCGCGAGGC CGGCGTAACG
TTCAACGTGC GTCCCCCTAG CCGCCGGCCC GGCCACTTCG TGCTGACCTT TGTCGAGCCG
CTCGACATCA ACCTCGCGTC GGTCGGCATC GATATGGGCG CCGAGCCACG CCGTCTTGCT
GCGCTTGAGC GGGCGCGCGA TACCGGCCAG TCGGTCAGTA GCGGCCGCCT GATCTTCAGC
GAGGGCAAGA ACCCGCACGT CGGCATCGCC CTGCGCTTGC CGGTGTATCG CAAGGGGCCG
AACCTGGACT CCGTGGCGGC GCGCCGCAGC GCCTATGTCG GCTCGGTGGG CGCGGGAATC
CGGGTGAATG ATCTGATGAG GGACCTGACC AGTAACGAGA ACCTGCGCAG GATCCGGTTC
CGCGTTTATG ACGCCGGAGA TTTCGCCGAG CCGGCGGTCT CGCCCTCCGC CACCAATCTG
CTCTATGACA GCGTGACTGG ACTGGTCACG CATGGCGGGG CGGCAAGCGA GGATGGCGGA
TCCATTCGCG GCACGAATTC GCACGTCCTG AGCATGGTCG TGGTGCGGAA CTTCGGAGGA
CGGCGCTGGG TGATCGCGTT TTCAGCCGAT GCGACAGCGA TCAGTGGTCC TCAGCGTTAC
CTTCCGGCGC TGGTGATGAT CTCCGGCTTG ATCATCAGCG TGCTGCTGAG CTGGCTGGCC
TACGCGTTGT CGAGTTCACG GGCGCGCGCC GTTGCCGTCG CCGAACAGAT GACGTACAAC
CTGCGTGAAA GCCAGGCTGC CCTCTCTGAG GCGCAGCAGA TCGCCCGCCT TGGCGACTGG
CGCATCGACC TGGAAAAGAG CAGCGCGCAC TTTTCCCGCG AAATGGCCCG GCTGCTCGGC
TGGCGCGGCG ACAAACCGAC CCCGGAAACG TTGTTCGAGG CGATTGACGC CGGCTACCGC
ATCGTGCTGC GCGAGAAGAT GCAGGCAGCC TTGCTGGATC GCCTGCCATT TGAGTTCGAG
TGTCCCTACC GGTTCCGGGG CCGGCGCCGC GGCTGGCTGC ACCTGATCGG GCACGCGCAT
GGTGCGCAGG ACAGCGCCGT CTTGCGGGGA ACCGCGCAGG ACATCAGCCA GCGCAAGTCC
GCGGAGCAAG CCCAGGCGCA GGAACACCAG ATCGCCTTGC ACCTGGCCAC TGCCACCAGC
GAAACCGAGG TATTGGAAGA TATCGTCCAC ACACTGCTTG AAGGCATGGA CTGGGAGGCC
GGCGCTTTCT GGCCCAGCGA GGATACCCAT GGGTTGAAGC TGCCGTCCGT CACCCTTGCC
CGTGTCAAGG CGCTGGAGCC CTGGCTCGCT GAACACCCTG AGTGTCTGGC CCGTGAGGCT
TATTCCCATG TGCCCCAATG GTATGCAAAC CGAAGCGCGC TGGCCCGCCA TGGGCAAGCC
CGGTGGCTCG TGGCGGGCGG TATCCGGGCG GTGTTCGCCT TCCCGCTGAA CAGAGGCCCC
GTGACGCTCG GCGTCGTCGA ACTCTATTCC CGCGCACGGC GCAGCCCGGA TGCGCACGCG
CTCACCATGG CGAGCGGTAT TGCCAATCAG ACAGGTCACT ACCTGCTAAG GCGCCAGGCC
GAGGAGGACC TGCGCTTCAT CGCCAATCAC GATGCCCTGA CCGGCTTGCC GAACCGGCTG
ATGTTCAAGG CCGAGTTCGA GAAGGCGCTG ACACGCGCGC GCAACAGCGA GCAGGCGCTG
CATGTCATCT TTGTCGACCT CGACGAATTC AAGGTCGTCA ATGACACCAT TGGCCACAAC
GCTGGCGATG CCGTGCTGCG CGAGATGGCC GACCGCCTAC GCGAAAGCCT GCCCGACGTA
GAACTGATCA GCCGCTTCGG TGGCGATGAA TTCATCGTGC TGCTGGACCC CAAGGGCGAC
ACGACGATCC TGGGCCGGAC GATCGCCAGG ATCCAGGCTG CACTTGAGCT CGCTTTCATC
GTCAATGACA CGCCGATTCA CATGACGGCA AGCATCGGCA TCAGCTCGTT CCCCGAGGAC
GGCAACGACT GGCAAACGCT GCTCAAGCAT GCCGACCTGG CCATGTACGG TGCCAAGCAG
ATTGGCAGGA ACGGCTACCA GTTCTATTGC CAGCGCATGA GCGCGTCCCT GCAGCGGCGC
ATCGACATGG AATCGCACCT TCGCCGAGCC ATCGAGCAGC AGGAATTTAT CCTCTACTAC
CAGCCGCGCA TTGTGCTCGA TTCGGGGGCG TGTACGGCAG TGGAGGCACT GATCCGGTGG
CGCCACCCGG ACCTCGGCTT GATCATGCCT GCAGATTTCA TTCCGTTCGC CGAGCAGAGC
GGCATCATTG TCGACATCGG CGCGTGGGCC TTGCGTGAAG CATGCCGTCA GAATGCCGCA
TGGGTCGCGC AAGGACTGCC GCCAGTGCGC GTCGCGGTCA ACCTCTCTGC ACGGCAATTC
GCCGACAAGT CGCTCCGGCT CACCATCATC GATGCCCTGC GACAAGCGAG GCTGCCAGGC
AACCTGCTAG AGCTTGAACT AACCGAAAGC ATGGTCATGC ACGATGCCGA ACGGGCCTCG
CGCTGGCTCT CGCGCCTCAA GCGAATAGGC GTGCGATTGG CGATCGACGA CTTCGGCACC
GGCTATTCCT CGCTCGCCTA CCTGAGCCGC TTCCCGATCG ATACCGTCAA GATCGACCGC
AGCTTCGTCC GCTATATACC GGAAAGCCGC AGCGACACGC AGATTACCTC CGCGGTGATC
GGACTCGGCC ACCGGCTCGG CCTGGAAGTG GTCGCCGAAG GCGTGGAAAA CGAGGCGCAG
CTCGAGTTTC TGCGCAGCGA GGGCTGCGAC GAAGTCCAGG GCTACTACTT CAGCCATCCA
CTGCCGCCGG CGAAGATCAC TGCGTTCCTG GCCAGCCGCA TGGAGAATGG TCCCGGTTTC
GAGCGGGGAC CACAACCGAT GCGCGCCTGA
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| Protein sequence | MRQTLARMLR PFGRLGSCTI TAGTLLLGVM TTAFVFVFCT NLLEKDVRLR FENDTGDVIQ
QIDTRIRLYT DVLVTMQALF GASEHVSRGE FRDFVSGLNL PQRYPGFQTL NYAPYVPADE
LDAFVARQRS DPILREAGVT FNVRPPSRRP GHFVLTFVEP LDINLASVGI DMGAEPRRLA
ALERARDTGQ SVSSGRLIFS EGKNPHVGIA LRLPVYRKGP NLDSVAARRS AYVGSVGAGI
RVNDLMRDLT SNENLRRIRF RVYDAGDFAE PAVSPSATNL LYDSVTGLVT HGGAASEDGG
SIRGTNSHVL SMVVVRNFGG RRWVIAFSAD ATAISGPQRY LPALVMISGL IISVLLSWLA
YALSSSRARA VAVAEQMTYN LRESQAALSE AQQIARLGDW RIDLEKSSAH FSREMARLLG
WRGDKPTPET LFEAIDAGYR IVLREKMQAA LLDRLPFEFE CPYRFRGRRR GWLHLIGHAH
GAQDSAVLRG TAQDISQRKS AEQAQAQEHQ IALHLATATS ETEVLEDIVH TLLEGMDWEA
GAFWPSEDTH GLKLPSVTLA RVKALEPWLA EHPECLAREA YSHVPQWYAN RSALARHGQA
RWLVAGGIRA VFAFPLNRGP VTLGVVELYS RARRSPDAHA LTMASGIANQ TGHYLLRRQA
EEDLRFIANH DALTGLPNRL MFKAEFEKAL TRARNSEQAL HVIFVDLDEF KVVNDTIGHN
AGDAVLREMA DRLRESLPDV ELISRFGGDE FIVLLDPKGD TTILGRTIAR IQAALELAFI
VNDTPIHMTA SIGISSFPED GNDWQTLLKH ADLAMYGAKQ IGRNGYQFYC QRMSASLQRR
IDMESHLRRA IEQQEFILYY QPRIVLDSGA CTAVEALIRW RHPDLGLIMP ADFIPFAEQS
GIIVDIGAWA LREACRQNAA WVAQGLPPVR VAVNLSARQF ADKSLRLTII DALRQARLPG
NLLELELTES MVMHDAERAS RWLSRLKRIG VRLAIDDFGT GYSSLAYLSR FPIDTVKIDR
SFVRYIPESR SDTQITSAVI GLGHRLGLEV VAEGVENEAQ LEFLRSEGCD EVQGYYFSHP
LPPAKITAFL ASRMENGPGF ERGPQPMRA
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