Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_C5972 |
Symbol | |
ID | 3607510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007336 |
Strand | - |
Start bp | 96680 |
End bp | 97981 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637688869 |
Product | Type I secretion membrane fusion protein, HlyD |
Protein accession | YP_293167 |
Protein GI | 72383813 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.802564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAC GCAACGCGGC GGCCTTTGCC GCCCCGCGCC ACTTTACGCA CTGGATCCTG TGGTCAACGC TCGCCTTCAT ACTGATCGGG CTTATGTGGG CTGCGCTGGC GCGGGTGGAC GAAGTCACGG TTGGCGAGGG CAAGATCATT CCCTCCAGCC AGGTGCAGGT CGTGCAGAAC CTCGAGGGCG GAATCGTTGC GAAGATCATG GTGCGGCCAG GACAGGTCGT GGCCAGGGAT CAGCCGCTGA TGCGCATTGA CGATACACGC TTCACGGCCT CCTACCAGGA AGGCCGAACG AAGGACGATG CACTGGTTGC CCGCATCGCG CGCCTGAGCG CTGAGGCAGG AGGCATGCCG TTTGACGATG GCGCCGCGAC AAATGCCGGC ACCCGTGGCT TTGTGTCGGA AGAGCGATCG TTGTTCGAAT CGCGCAAACG CGCACTGGAA GCCAATCTCG CGGTGGTTCG CCAGCAGGCG GAGCAGCGCC GCCAGGAGCT GGCGGAAAAG CGCTCGCGCG AGCAGCAGTT GCGGCAGAGC CATCAGCTGG TGTCGAAGGA ATTGACGATG ATGCGGCCCA TGGTGGCGCA AGGCGTGGTC TCCGAGGTGG ATTTGCTGCG ACTGGAGCGG CAGGCGAACG ACCTGCAGGG CGAACTGGAG GCCACGCGGC TGGCGATGCC GCGGCTGGAT GCAGCGTACC GCGAAAGCCT GAAGAAGATC GAGGAACTGA CCACGCATTT CCGTGCGGAG GCGATGCAGG ACCTCAACCA GGCGAAGGCA GAGCAGCAGG CGCAGAGTGC CACCAACACC GCATTGCAGG ATCGTGTGGA TCGTACGCTG GTCAAGGCTC CCGTGGCCGG GATCGTCAAG CAGCTGAAGA TCAATACCGT GGGTGGCGTG ATCCAGCCGG GCATGGATCT GGTGGAGATC GTACCGCTGG AGGACACGCT GCTCGTGGAG GCGCGCGTGC GCCCTGCGGA CATTGCGTTC CTGCGGCCCG GGCAGCCTGC CATGGTCAAG CTCTCCGCCT ACGACTTCTC TATCTATGGC GGATTTCCGG GTACGGTGGA GCACATCAGC GCCGACACGA TGATGCCGGA ACGCCCCGGC GAACGGCCGG AGAGCTACTA CCTTGTGCGC GTGCGCACGC GGGACAACCG CCCCACGGGC AGCACCGCGC AGGTGCCGAT CCTGCCCGGC ATGGTGGCGA CCGTGGATGT GCTCACGGGC CAGAAGACCG TGCTGCACTA CATGCTCAAG CCGATCATCA AGACCAAGGA AATGGCGTTG CGGGAACGCT GA
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Protein sequence | MSERNAAAFA APRHFTHWIL WSTLAFILIG LMWAALARVD EVTVGEGKII PSSQVQVVQN LEGGIVAKIM VRPGQVVARD QPLMRIDDTR FTASYQEGRT KDDALVARIA RLSAEAGGMP FDDGAATNAG TRGFVSEERS LFESRKRALE ANLAVVRQQA EQRRQELAEK RSREQQLRQS HQLVSKELTM MRPMVAQGVV SEVDLLRLER QANDLQGELE ATRLAMPRLD AAYRESLKKI EELTTHFRAE AMQDLNQAKA EQQAQSATNT ALQDRVDRTL VKAPVAGIVK QLKINTVGGV IQPGMDLVEI VPLEDTLLVE ARVRPADIAF LRPGQPAMVK LSAYDFSIYG GFPGTVEHIS ADTMMPERPG ERPESYYLVR VRTRDNRPTG STAQVPILPG MVATVDVLTG QKTVLHYMLK PIIKTKEMAL RER
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