| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5879 |
|---|
| Symbol | |
|---|
| ID | 3614532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 2721246 |
|---|
| End bp | 2722031 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637695311 |
|---|
| Product | flagellar biosynthesis protein FliR |
|---|
| Protein accession | YP_300066 |
|---|
| Protein GI | 73539699 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
|---|
| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.250463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGAAG TCACCAACGC GCAGCTCTAT GGCTGGATCG CGACCTTCCT GTGGCCGTTC
TTCCGGCTGC TCGCGCTGAT CGGCACGGCG CCGCTGTTCG GTGAATCCAC CATCCCTGGC
CGCGTCAAGG TGGGCCTGGC CGCGCTCACC GCGATGGTGG TTTCTCCCAC GCTTGGCAAC
CTGCCCGTGG TGCCGGTCTA CTCGTGGCAA GGCCTGATCA TCATCCTCAA CGAGGTTGGC
ATCGGACTGG CTACCGGCTT CACCATGCGG CTGGTATTTG CGATCGTGCA GCAGGCCGGC
GAAATCATCG GCATGCAGAT GGGCCTGGGC TTCGCCTCGT TCTTCGACCG CGCCGCCGGC
GGCCAGACCA TGGTGCTGGC GCGCTTCCTC AATATCATCG CCGTGCTGCT GTTCCTGGCC
ATGGATGGCC ACCTGCTGAT GCTTGGCGCG CTCGTCGACA GCTTCCAGGG ATTGCCTATC
GGCGCCACGC CGGTGTCGGG CGAAGGCTGG CACGCCGTAG CGCGTGCAGG CGGCATGGTG
TTCTCGTCGG GGCTGCTGCT CGCGCTACCG ATGATTGCCG CGCTGCTGAC GCTGAACCTT
GCCATGGGCA TTCTGAACCG CGCGTCGCCG CAGCTGTCGA TTTTCGCGGT CGGCTTCCCG
GTCACGCTAT CGGGCGGTCT GCTCGTGCTG GCGCTGGTGA TGCCGCAGAT GGGCAGCTAC
ATGCAGCACA TGATCGAAGC GGGACTGGAC GCGGTGAACA CGGTGCTGAG CCAGTTCGCG
CGCTAA
|
|---|
| Protein sequence | MIEVTNAQLY GWIATFLWPF FRLLALIGTA PLFGESTIPG RVKVGLAALT AMVVSPTLGN
LPVVPVYSWQ GLIIILNEVG IGLATGFTMR LVFAIVQQAG EIIGMQMGLG FASFFDRAAG
GQTMVLARFL NIIAVLLFLA MDGHLLMLGA LVDSFQGLPI GATPVSGEGW HAVARAGGMV
FSSGLLLALP MIAALLTLNL AMGILNRASP QLSIFAVGFP VTLSGGLLVL ALVMPQMGSY
MQHMIEAGLD AVNTVLSQFA R
|
|---|
| |