| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5855 |
|---|
| Symbol | |
|---|
| ID | 3614834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 2692852 |
|---|
| End bp | 2693775 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637695287 |
|---|
| Product | intradiol ring-cleavage dioxygenase:catechol dioxygenase, N-terminal |
|---|
| Protein accession | YP_300042 |
|---|
| Protein GI | 73539675 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACCA TCCAATACAA AGAAAACGAT CTGCGCCTGA TCGAAGACGA GCATTCCGTC
ACCCAGATCG TCCAGGCCGC CATGGCTCAA ACCAGCAGCC CGCGCCTGCG CTTCGTCATG
GGTCTGCTTG TCCAGCACCT GCACGACTTC CTCCGTGAAG TGCGTCCAAC AGACGAGGAA
TTTGAAAAAG CGCTGGAGTT CGTCGCCGCG CTGGGCCACG CAACCCACGC CACCAACAAC
GAAGTGGTGC TGGCCGCCGA CGTGCTGGGT CTCTCCACGC TGGTTACCGT GATGAATAAC
AACACCACGG ACGGCCGCAC GCCTGGTGCG CTGCTCGGCC CGTTCTACCG CGCCAACGCC
CCACGTTACG ACTGCGGCGA CTGCGTGGTG CAGGATGACG CACCAGGTCT GCCATTGTTC
GTGCGCGGCA CCGTGCGCGC GACGGACGGC ACACCGTTGT CCAACGCACT TGTGGAAATC
TGGCAGGCAT CGCCCGTCGG CCTGTATGAC AACCAGGACC CGCGCCAGCC CGACCGCAAC
CTCCGCGGCT GCTTCCAGAC CGACGCAGAA GGCGGGTACC ACTTCCGTAC CGTGCGCCCG
GCCGGCTATC CGGTGCCGAC CAATGGCCCG ATCGGCACAC TGCTCGACGC ACAGCAACGC
CATCCGTACC GCCCAGCGCA TATCCACTTC ATCGTCGCCG CACCGGGCTA CCGCACGCTG
GTCACGCAAG TGTTCGTGGA CGAGCCGCGA GCGCTCGAAT CCGACGTGAC ATTCGGCGTG
CACCGACAGC TCGTCGGGCA ACTCGAACTT GTCGACCAGG GCCGCAGCCC ATGGGGCGAC
CAGCCCGCGC CGTTCTACAC GATGGACTTC GACTTTACGC TCGAACCGGG CGAGCAGACC
TTCCCTAAGC CGCCGATCGA CTGA
|
|---|
| Protein sequence | MQTIQYKEND LRLIEDEHSV TQIVQAAMAQ TSSPRLRFVM GLLVQHLHDF LREVRPTDEE
FEKALEFVAA LGHATHATNN EVVLAADVLG LSTLVTVMNN NTTDGRTPGA LLGPFYRANA
PRYDCGDCVV QDDAPGLPLF VRGTVRATDG TPLSNALVEI WQASPVGLYD NQDPRQPDRN
LRGCFQTDAE GGYHFRTVRP AGYPVPTNGP IGTLLDAQQR HPYRPAHIHF IVAAPGYRTL
VTQVFVDEPR ALESDVTFGV HRQLVGQLEL VDQGRSPWGD QPAPFYTMDF DFTLEPGEQT
FPKPPID
|
|---|
| |