| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5790 |
|---|
| Symbol | |
|---|
| ID | 3613975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 2613685 |
|---|
| End bp | 2615256 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637695222 |
|---|
| Product | fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal:FAD dependent oxidoreductase |
|---|
| Protein accession | YP_299977 |
|---|
| Protein GI | 73539610 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.545575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAGA AGACGCATGC AGTGAACTGG TCGCCGCCGG CTTGGGACGA CGAGGCCGAC
ATGGTCGTGG TCGGCTACGG CGGCGCTGGC GCAACGTTTG CCTTCGCAGC CGCAGAGGCC
GGCGCCGACG TGCTGGTGCT GGAAAAGGGC GATCGCGGCG GCGGCAATTC GGTTTGCGTC
GCGGGCGGGC TCATCATGAC CTCGTCCGAC GAGGAAGCCA CGTTCGACTA CATGAACTGG
CTGTGCGCCG GCCAGACCGA CGAGCCGGTC CTGCGCAACT TTGTCACAGG CCTGAAGGAC
ATCCCGGCCT TCCAGCACAA GCTGGAGCTG CCGCTGAAGG ACAACCCCAG GCCCTTCAGC
GCGCCGGGAT TCTTTCCTGA GTTTCCGGGC GCGCCAGGCG CTGCGAGCAT CCACGGTATG
AGCGTGGTGG CCGCGCCCGG CGGGGCAGGG CTATACAACG CCATCGCGGC GGTAGCTGAA
AAGCATGGTG CGCGCGTTCA GTGCAATACG ACGGTGACGC AGCTCGTGCA GGATCCGGCG
TCGCGAGGCA TCCTGGGCGT GCTCGCCCGC ACCGCTGAAG GCCGCACCAT CGCCGTGAAG
GCACGCAAGG CGACAGTGCT TGCCAGCGGG GGCTTCGAGT TCGATGCCGA GATGTGCCGG
CAGTACCTGA CACCGTGCCC GATCCATTTC CTTGGCAGCC CGAACCTGAC CGGCGACGGC
ATCCGCATGG CGCAGGAGGT CGGTGCCCAG CTCTGGCACA TGAATGCCGT GGCAGGGCCG
TTGAACTGGG GCATCAGGGT GGACGGCGGC AGGGTGTACG TGACGTACGA CCTCAACAAG
GTAGCGGGCT TCGGCTACAA CTCGGGCGCG TTCAAGGACG GCGGCAGCCT GATCTGGGTG
AACCGTGAGG CGGCACGCTT CCACAACGAG ACCACCGATA CGGCCGATGT CCGCCACGGC
CTCAGCAACC GCGCCACCTG GCTGGCCACC AACCCCGATG TGCCCGAGTT CATCAATGTG
CCTGCCTTCC ACATCTTCGA CGAGAAGGTG CGCTCGGGCG GCGCAGCCAT GACGACGCTG
AACTCGCGCA CCCCGCCGTG GAGCCAGGAC AACCTCGCCG AACTGGAGAA GGGCTGGATC
CTCCAGGCGG ACACGCTGGA GGAGCTGGCG CTGAAGTGCC GCTGGGATGC GGAGCCCGGC
GCCTGGCCCG CCGGCCATCT CGACCCTGAA GCGCTGAAGG CCACCGTGGC GCGCTACAAC
GCGCAATGCG CAGCCGGCGA GGACACCGAC TTCGGCCGCA AGAATTTCCT CGTGCCGCTC
GATAAAGGTC CGTACTACGC CATCGGCCCG ATGCTGCCGA CCTTCCTGAA CACGCACGGC
GGCCCCCGAC ACGACGCCCG CCAGCGCGTG CTCGACCAGC GCGGCGCGCC CATCCCACGG
CTGTACGCCA TCGGCGAATG CGGCTCGCTG TGGGGGCCTT ACTACAACTC GATGGGCGAC
ATCGCGGAGT TCATCGTGTC GGGCCGCACC GCCGCGCGCG CGGCCCTGGA AGAAGACGCC
TGGGACCGCT GA
|
|---|
| Protein sequence | MEQKTHAVNW SPPAWDDEAD MVVVGYGGAG ATFAFAAAEA GADVLVLEKG DRGGGNSVCV
AGGLIMTSSD EEATFDYMNW LCAGQTDEPV LRNFVTGLKD IPAFQHKLEL PLKDNPRPFS
APGFFPEFPG APGAASIHGM SVVAAPGGAG LYNAIAAVAE KHGARVQCNT TVTQLVQDPA
SRGILGVLAR TAEGRTIAVK ARKATVLASG GFEFDAEMCR QYLTPCPIHF LGSPNLTGDG
IRMAQEVGAQ LWHMNAVAGP LNWGIRVDGG RVYVTYDLNK VAGFGYNSGA FKDGGSLIWV
NREAARFHNE TTDTADVRHG LSNRATWLAT NPDVPEFINV PAFHIFDEKV RSGGAAMTTL
NSRTPPWSQD NLAELEKGWI LQADTLEELA LKCRWDAEPG AWPAGHLDPE ALKATVARYN
AQCAAGEDTD FGRKNFLVPL DKGPYYAIGP MLPTFLNTHG GPRHDARQRV LDQRGAPIPR
LYAIGECGSL WGPYYNSMGD IAEFIVSGRT AARAALEEDA WDR
|
|---|
| |