| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5719 |
|---|
| Symbol | |
|---|
| ID | 3613433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 2548758 |
|---|
| End bp | 2549522 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637695151 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_299907 |
|---|
| Protein GI | 73539540 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGA ATCTTTTCGA CCTGACCGGA AAGATCGCCC TCGTGACGGG CGCGAGCCGA
GGCATAGGCG AGGAAATTGC GAGGCTGCTC GCTGAGCAGG GCGCGTACGT GATCGTGTCG
AGCCGAAAGC TTGATGACTG TCAGGCTGTC GCCGACGAGA TTGTCAAGGC GGGCGGCCAG
GCGGAGGCGT TGGCGTGCCA TGTCGGGCGG ATGGAGGATG TTGCCGCAGT GTTCGAGCAT
ATCCGCAGCA AGCACGACCG TCTCGACATC CTCGTTAACA ACGCGGCGGC GAATCCCTAT
TTTGGCCACA TCCTCGACAC CGATCTTGGC GCCTACGAGA AGACGGTCGA AGTGAACGTG
CGCGGCTACT TCTTCATGTC AGTCGAAGCC GGCAGGATGA TGAAGGCGCA AGGCGGCGGC
GCGATCGTCA ATACCGCGTC GGTGAACGCG CTGCAGCCAG GCGAAAAGCA GGGCATCTAC
TCAATCACGA AGGCCGCGGT CGTCAACATG ACGAAGGCGT TCGCGAAGGA GTGCGGGCCG
CTCGGCATCA GGGTGAACGC GCTGCTTCCT GGCCTCACAA GGACAAAATT TTCGGGTGCG
CTGTTCGAGG ACCCGGCAAT CTATGAGCGA TGGCTCGCCG AGATCCCGCT GCGTCGTCAC
GCGGAGCCCC GCGAAATGGC CGGCACGGTG CTCTATCTTG TGTCGGATGC TTCGAGCTAT
ACCAATGGCG AATGCATTGT AGTCGACGGT GGCCTGACAA TCTGA
|
|---|
| Protein sequence | MATNLFDLTG KIALVTGASR GIGEEIARLL AEQGAYVIVS SRKLDDCQAV ADEIVKAGGQ
AEALACHVGR MEDVAAVFEH IRSKHDRLDI LVNNAAANPY FGHILDTDLG AYEKTVEVNV
RGYFFMSVEA GRMMKAQGGG AIVNTASVNA LQPGEKQGIY SITKAAVVNM TKAFAKECGP
LGIRVNALLP GLTRTKFSGA LFEDPAIYER WLAEIPLRRH AEPREMAGTV LYLVSDASSY
TNGECIVVDG GLTI
|
|---|
| |