| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5309 |
|---|
| Symbol | |
|---|
| ID | 3612747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 2072381 |
|---|
| End bp | 2073934 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637694735 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_299499 |
|---|
| Protein GI | 73539132 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTTTG CATATTTCCT GCGCCGCGCC GCGCGCTACT GGGGCGACCT GCCGGCCGTC
CTCTATCGCG ATCAGGTCCT GACCTACCGC GAGCTCGACG AGCGCTCGAC GCGGCTCGCC
AACGCGCTGC TCGCGATGGG GCTGCGCCAG GGCGACCGCG TGGCGGTGCA GTCGCGCAAC
CGGCCGGAAC TGGTGGAAAT CGAATGCGCG CTGTACAAGG CGGGCCTGGT CAAGGCGGCG
CTCAACCCGC GCTTTACTGC GCCCGAGGCG TCCGACGTGG TGGAAAACTG CCAGCCGCGC
GTGCTGATCG CCGGGCCGGG CTACGCCGGC TATTCGCCGG CCACGCGCGG CTTCGGGTCG
GTGGAAACGT TCGTCTCTAT CGGCAAGGAT GCGCCCGGCT ATGCAGGCTA TGAAGCGCTC
CTGGCTGAAG CCAGCACCGA ATTGCCCGAG ATCACCCCCG CGCCCGGCGA TCTCGCCGTG
CTGCATTTCT CGTCCGGCTC GACCGGCAAG ATCAAGGCCG CCATGCAGAG CTACGGCAAC
CGCCTGGCAG CGCTGCGCAA GATGCTGATG GGCATGGACA GCCCGCCACG GCCCGGTGAC
CGGCTGGCGC TGATCGGGCC CGTCACGCAC GCGTCCGGCA TGCTGATGCA GCCTTACCTG
TACTGCGGCG CCACGCTGGT GCTGTTCGAG AAATTCGAGC CGGCCGATTT CCTGGCCGAG
GTGGCGCGCC TGCGCATCAC GCACGTGTTC ATGGTCCCGG CCATGATCAA CATGCTGCTG
GCCGAACCCT CGCTGGCCAG TGCGGACCTG AGCAGCCTGA GGACGCTCGC CTATGGCGCT
GCGCCGATGG CGCCGGCACG CATCCGTGAA GCGTGGGAGC GCATCGGTCC CATCCTGTCG
CAGGGCTACG GCGCGAGCGA GTCCACCTCG GGCGTCACGC GCCTGTCTAC GGCCGATCAT
GCGCAAGCCA TCGCCTCGTA CCCCGAGCGG CTGGCCTCAT GTGGCCGCGC GCTCGGCGAG
ACCGAGGTGC GCGTGGTCGA TGAACAGGGC CGCGAGGTGG CCGTCGGCGA GATCGGCGAA
CTGGTGATCC GTGGCGAGGA CGTGTTCCAG GGCTACTGGG GCGAGCCGGC GCTGACGCAG
GAGGTGCTCG TCAATGGCTG GCTGCGCACC GGCGACATGG CGCGCGTCGA CGCGCAGGGG
TACCTGTACC TGGTGGACCG CAAGAAGGAC ATGATCATTT CCGGCGGCTT CAACGTCTAC
CCGACCGAGG TCGAAGCCAC GCTGTACCAG CACCCCGACG TGCTGGAGGC GTGCGTGATC
AGCGTGCCCG ACGAGACCTG GGGCGAAAGC GTCAAGGCTG TCGTCACGCT GCGCCCGGGC
CGGCAGGCCA GCGCCCAGTC GCTGATCGCG CATTGCCGCG AACGGATTGC CGACTACAAG
TCGCCGCGCT CGGTGGACTT CGTCGACGAA CTGCCCAAGA ACGCCAGCGG CAAGCTGGCC
CGCAAGCTGG TGCGCGAGCC GTACTGGCAG GGCGCATCGC GCCGCGTGAA TTGA
|
|---|
| Protein sequence | MGFAYFLRRA ARYWGDLPAV LYRDQVLTYR ELDERSTRLA NALLAMGLRQ GDRVAVQSRN
RPELVEIECA LYKAGLVKAA LNPRFTAPEA SDVVENCQPR VLIAGPGYAG YSPATRGFGS
VETFVSIGKD APGYAGYEAL LAEASTELPE ITPAPGDLAV LHFSSGSTGK IKAAMQSYGN
RLAALRKMLM GMDSPPRPGD RLALIGPVTH ASGMLMQPYL YCGATLVLFE KFEPADFLAE
VARLRITHVF MVPAMINMLL AEPSLASADL SSLRTLAYGA APMAPARIRE AWERIGPILS
QGYGASESTS GVTRLSTADH AQAIASYPER LASCGRALGE TEVRVVDEQG REVAVGEIGE
LVIRGEDVFQ GYWGEPALTQ EVLVNGWLRT GDMARVDAQG YLYLVDRKKD MIISGGFNVY
PTEVEATLYQ HPDVLEACVI SVPDETWGES VKAVVTLRPG RQASAQSLIA HCRERIADYK
SPRSVDFVDE LPKNASGKLA RKLVREPYWQ GASRRVN
|
|---|
| |