Gene Reut_B5136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B5136 
Symbol 
ID3612710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp1874827 
End bp1876626 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content61% 
IMG OID637694564 
Producthistidine kinase, HAMP region:Cache: chemotaxis sensory transducer 
Protein accessionYP_299328 
Protein GI73538961 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.481543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCAT CGATTCGCAC GAAAATTCAG GTCATTTCCA CCGGCATTGT CGTGACATCG 
CTTGCGCTGA CCGCTTGTGC AACCTATGTC ATCGTTCGCG ACAGCAACCT GGAAACGATC
CGGCAAAACC TCGATGCCAT CGCTACCGGC CATGCACTCG CGCTCGATGA ATGGGTGACA
GGGAAAGCAA CCATGGTGGC TGCCGCCGCA GAGCAGATTG CGCCAGGCGA CCCACGCGGT
ATTGTTCGTC AGCTGCAGAA GGCCGGCGCA TTCCCGATCA CCACTGCCGG CTGGCAGGAC
AAGTCCTTTG TCGCAAGCAA GGACCAGATG CCGTCAGGCT TCGATCCGAC TGCGCGACCC
TGGTACAAGG AGACCCTGGC AGCGGCTAAG CCAATCGTGA CGAAGCCATA CGCTGACGCA
ACGACGGGCA AGCCGTTTGT CTCGTTCGCC GCACCCATCG TGCGAGACGG CGTGACAAGT
GGCGTGGTGT CTGCGGTAGT GTCCCTGGAT GGCGTACGCG ATGTCGTGAC CGCCGTGCGC
CCGACGCCCG AGAGTCTTGG CTTTGTGGTC GACAAGGATG CCAATATCCT GGCGCACCCC
GATGCAAAGT ACATCCGCAA GCCGGCGTTG GAGTTGTCGC AAGCGTTGAC GCCACAGGCA
TTGGCATCGC TTGAAAGCGA AGGAAATCCG CTCGAGATCG AGCTCGACGG CAGAATGAAG
CTGCTGCGCG CAAGGCCGAT TCACGGCACG AACTGGCAGC TCGTCGTGGC GCTGGATAAG
GCAGAGGCCA CTGCAGCCCT GAATCGGGTG ATCAAGACCT CGGCGTTAGC CATCGTGCTG
CTGGCGGTGG TGGCCGCGGC GCTGAGCGGC TTGTTCACCG CACGAGCGTT TCGCCGGCTA
TCCGAAGTGC GAGACGCCAT GAATGAAATC GCCACCGGTG ACGGCGATCT GACCCGCCGT
CTTCCGGTCG ACGGCCGTGA CGAGGTCTCG CAGATCGCGA CATCCTTCAA TACCTTCGTC
GAAAAGCTCG GCAGCACACT GACCAGGATT CGGCGTGGCA GCGAATCGGT GAAGGTCGCG
ACCAACGAAA TCGAGGCTGG AAACCAGGAC CTGTCGCGTC GTACGGAAAT GGCGGCGAGC
AATCTGGAGG AGACAGCGGC TTCGCTGTCC GAGCTGACCG GATCGGTGAG CCGCTCCGCC
GAAGCAACAG TTCAGGCAAC ACGTCTTGCA TCATCCGCCA GTGACGCGGC GAAGCGTGGC
GGCAATGTCG TTTCCGACGT CGTCGCGACG ATGGAGGACA TCGCCCGTTC GTCATCGAGG
ATCGGGGAGA TCATCGGCGT CATCGACGGC ATTGCCTACC AGACCAATAT CCTTGCACTG
AATGCTGCAG TCGAGGCCGC ACGCGCTGGC GAACATGGCA AAGGCTTCGC CGTGGTAGCC
GGCGAAGTGC GCAGCCTTGC GCATCGGAGT GCCTCGGCGG CCAAGGAGAT CAAGACGCTG
ATCGAGACCT CCGAAGTCAG CGTACAGTCC GGGACCCAGC GGGTTCAGGC TGCCGGCGAT
GCGATGACGG AAATCGTCGA CGGCATCCGC CAGGTCTCCT CGCTCATTTC CGAGATCAGT
GCGGCCATGG GCGAACAAAG TACAGGCCTC AGCCAGATCA ATCAGGCAGT CGAGGAAATG
GAGCAAGCCA CGCAACAGAA TGCCGCGCTG GTGGAACAGG CAGCGGCGGC TTCGTCGCTG
CTGGATGAGC AGGCCGGCGA TCTGGCGGAG GCCGTGGCGG GATTCAAGCT GAATAGCTAA
 
Protein sequence
MLSSIRTKIQ VISTGIVVTS LALTACATYV IVRDSNLETI RQNLDAIATG HALALDEWVT 
GKATMVAAAA EQIAPGDPRG IVRQLQKAGA FPITTAGWQD KSFVASKDQM PSGFDPTARP
WYKETLAAAK PIVTKPYADA TTGKPFVSFA APIVRDGVTS GVVSAVVSLD GVRDVVTAVR
PTPESLGFVV DKDANILAHP DAKYIRKPAL ELSQALTPQA LASLESEGNP LEIELDGRMK
LLRARPIHGT NWQLVVALDK AEATAALNRV IKTSALAIVL LAVVAAALSG LFTARAFRRL
SEVRDAMNEI ATGDGDLTRR LPVDGRDEVS QIATSFNTFV EKLGSTLTRI RRGSESVKVA
TNEIEAGNQD LSRRTEMAAS NLEETAASLS ELTGSVSRSA EATVQATRLA SSASDAAKRG
GNVVSDVVAT MEDIARSSSR IGEIIGVIDG IAYQTNILAL NAAVEAARAG EHGKGFAVVA
GEVRSLAHRS ASAAKEIKTL IETSEVSVQS GTQRVQAAGD AMTEIVDGIR QVSSLISEIS
AAMGEQSTGL SQINQAVEEM EQATQQNAAL VEQAAAASSL LDEQAGDLAE AVAGFKLNS