Gene Reut_B5081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B5081 
Symbol 
ID3613366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp1821241 
End bp1823220 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content67% 
IMG OID637694509 
ProductPAS 
Protein accessionYP_299273 
Protein GI73538906 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.803763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCGC GCGTTGCCCA CCAAGGCCGC CTGATCCTCA ACGTGGAGGA CCGCGAAGGG 
CCGCGCTATG TGAAGAGCAG CATCCTGCAA CGCGCCGGAT TTTCGGTGCT GGAAGCTTCG
ACCGGACAGG CAGCGTTGTC GCTGGTGCGG CAGCATATGC CTGCGCTGGT GCTGTTGGCG
CTGCGCCTCC CGGACATCAG CGGGCTTGAG GTCTGCAAGC TGCTCAAGTC CGACCCCCAC
CTTTCCAGTA CGCCCATCCT GCTGACTTCG CCGGCGCTTG CCACTTCAGC GCAGCGCGTG
GAAGCACTGG ATTGCGGCGC GGACAACTTC ATGGTCGAAC CGTCAGAGCC CGAGGAACTG
ATCGCCAGTA TCCAGTCGCT GCTGCGGCTG CGCCGGGCCG AGGATGCCTA TCACCGCACC
AGCCAGGCCC TGCACGACAA CGAGGACATG TTCCGCCAGC TCGCGGAGTC GCTCGTCGAT
GTGGTCTGGC TGCTTGACGC GCGCGAGCGC CGCCTGTTGT TCGTCAGTCC GCGCCTGTCG
GAGCTGTGCG GCCAGACGCC GGAAAAGATG ATGGAAGACC CGTCGTGCTG CCTGGATCGC
GTCGTACCGG CGGATCGTGC GCGCGTGGCA AGCGCCGTTG CCAGCATGCT GCAGGACGGC
AAGCTCGACA TCGAATTCCA GTTCATGCAC GCCGACGGCG GCATCCGTGA AGTCCTTGCA
CGCGCCTTCC CCATGCGCGG CACTGGCAAT GAGACACTGC GCGTGGCCGG CACTTGCCAG
GACGTCACCA CGCAGAACCG TGCCCGGCGC GCGTTGCGCG GCGAGGAGCG CCGCAAGGAG
CAGTTCCTGG CCATGCTTGC GCACGAATTG CGCAACCCGC TGGCCCCCAT GCGCAGCGCG
GTCGACCTTC TGCAACAGCC ACAACCCGCG CCGGCCGACG CATTCCGCGC GCGCGACGTG
ATCGGACGCC AGCTCAGGCA CTTGTCGCAA CTGGTGGACG ACCTGCTCGA TATCTCGCGC
TTCAACCAGG GCAGGATCAC GTTGCGACAG GACCTCGTGG AACTGCGCGG CGCGCTCAAC
ACCGCGGTGG AAACCGTAAG GCCCGTCATG GAAGCCCAGC AGCACACGCT GCGGCTGTCC
TTGCCTGAAC AGCCGCTGCC CGTGCGCGGC GATATGGTCC GGCTCACCCA GATCTTCAGC
AATCTGCTAC ACAACGCCGC GGCCTATACG CCGGCCGGCG GACAGATCCG GCTCGATGTC
ACGGTGACGG ACGGACGCGT CGACGTCAGG GTGCACGACA ACGGCATGGG CCTTACGGGG
ACACTGCAGC GGCTGCTATT CGACCCGCTG GCACCCGAGG AGCCGGGCAG CCCGCCCGTT
GCGGGAGCCG GATATGCGGA CGATGGCGCC GATACGGGTG GCGCGCAGTC TTATATGCCG
GAAGGTCCCG GCATCGGCCT GACCCTTGTC CAGCAGCTCG TGCGGCTGCA TGGCGGCAGT
ATCCGGGCAG AAAGCCCGGG CCCCGGCGAA GGCAGCACCT TCATCGTGGA GTTGCCGGTC
GAGCCGTGGC AGAACTGGCA TCCGGCCGAG ACCATGGCGC CTCGGCCGTC CGGCCCGCCG
CGCGTGATCA TGCTGGTGGA CGACAACACC GATGCGCTTG AGGCCATGAG CATGACGCTG
AGGATGCTGG GACACACCGT GGTGACCGCG CCCGATGGCC CCAGTGCCGT TGCACGCGCA
CCGGAAGTGA AGCCCGAGGT AGTGCTGCTC GATCTTGGCA TGCCCGCCAT GGATGGCTTT
GAGACCGCGC GGCGCCTGCG CGCGCTGCCC GAAATGCGCG GAGCGACACT CGTTGCGCTC
ACCGGCTACG GGCAGCCCGA AGACCGCCGG CGGGCGCTGG AAGCGGGATT TGACCGCCAT
CTGGTCAAGC CGGCCAGCCT GGAAGCGCTG ACCCGGCTGT TCGAGGAGCA AGGCAGCTGA
 
Protein sequence
MTSRVAHQGR LILNVEDREG PRYVKSSILQ RAGFSVLEAS TGQAALSLVR QHMPALVLLA 
LRLPDISGLE VCKLLKSDPH LSSTPILLTS PALATSAQRV EALDCGADNF MVEPSEPEEL
IASIQSLLRL RRAEDAYHRT SQALHDNEDM FRQLAESLVD VVWLLDARER RLLFVSPRLS
ELCGQTPEKM MEDPSCCLDR VVPADRARVA SAVASMLQDG KLDIEFQFMH ADGGIREVLA
RAFPMRGTGN ETLRVAGTCQ DVTTQNRARR ALRGEERRKE QFLAMLAHEL RNPLAPMRSA
VDLLQQPQPA PADAFRARDV IGRQLRHLSQ LVDDLLDISR FNQGRITLRQ DLVELRGALN
TAVETVRPVM EAQQHTLRLS LPEQPLPVRG DMVRLTQIFS NLLHNAAAYT PAGGQIRLDV
TVTDGRVDVR VHDNGMGLTG TLQRLLFDPL APEEPGSPPV AGAGYADDGA DTGGAQSYMP
EGPGIGLTLV QQLVRLHGGS IRAESPGPGE GSTFIVELPV EPWQNWHPAE TMAPRPSGPP
RVIMLVDDNT DALEAMSMTL RMLGHTVVTA PDGPSAVARA PEVKPEVVLL DLGMPAMDGF
ETARRLRALP EMRGATLVAL TGYGQPEDRR RALEAGFDRH LVKPASLEAL TRLFEEQGS