Gene Reut_B4575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B4575 
Symbol 
ID3613539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp1254863 
End bp1256107 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content68% 
IMG OID637694004 
Productputative transport transmembrane protein 
Protein accessionYP_298769 
Protein GI73538402 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCTC CGCACGGAAC CCCCGACTCG CTTTCTCTTT CCGCCTCCAC CACCGACAAC 
CCAGCCTCTA CGGCACATAG CCGCCGCGCC TTGCTCGCGC TCGGCGTGGG CAGCTTTGGC
ATCGGCACTG GCGAATTCGT CATCATGGGC CTGTTGCCCG ACGCCGCGCG CGACCTTGCC
ATCACGATCC CGCAAGCCGG GCACCTGATC AGCGCCTATG CGCTGGGCGT GGTCATCGGC
GCGCCGCTGC TGGCTGTGCT CGGCGCGCGC TTGCCGCGGC GCAATCTGCT GATCGCGCTG
ATGGCGGCCT TTGCCATCGG CAATTTCGCC AGCGCATTTG CGCCCTCCTA CGCTTCCATG
CTCATCGCGC GGCTGCTGAC CGGCTTTCCG CATGGCACCT ACTTCGGCGT GGCGGCACTG
GTGGCGGCGG GACTGGTGCC CCGCGAACGT CGCGGACAGG CGGTGGGCCT GGTCATGCTA
GGGCTGACTG TCGCCACGCT GGTTGGCGTG CCGATTGCCG CTACGGTCGG CACCTGGCTT
GGCTGGCGCG CCGCCTTCAT GATCGTCGGC GCAATCGGTG CGCTGACGGC ATGGCTGGTG
TGGTGCTGGG TCCCGTTCTT CCCGGCCGAT CGCAAGGCGA GCCCGCTGCG CGAGCTGACT
GCACTGCGCC GCAAGCAGGT GTGGCTGACG CTCGGAATTG GCGCGATCGG CTTTGGCGGC
ATGTTCGCGG TGTTCAGCTA TATCAAACCC GCCATGCTTG AAGTGGCGCA AATGCCGGCG
AGCGCGATTC CGTTTGTGCT CGCACTGTTC GGTATGGGCA TGGTCACCGG GAACCTTGTC
GGCGCGAAGC TCGCCGACAA GGCCCTGATG CCAGCCATCG GCGGCGTGCT GGTGTGGTCG
GCACTGGTGA TTGGGGCGTT CACGCTGACC GCGCCGCATG CGTGGCTGGC CGCGGTCAAC
GTGCTGCTGA TCGGGACCGT CGTCGCGCTC GGACCGGCGC TGCAGATCCG CCTGATGGAC
GTAGCGGGCG ATGCCCAGAC ACTGGCCGCC GCGCTCAATC ACTCGGCCTT CAATATGGCG
AATGCCCTGG GTGCATGGCT GGGCGGCGTG AGCATTGCCG CCGGGCTGGG CTGGACGTCG
ACCGGATGGG TCGGCGCCCT GCTCGCTGTG GGCGGACTTA TCGTGTTTGC GTGGTCCGCG
CTGGCCATGC AGCGCGGTGG CGTCACCATG CCGCAGGCGT CCTGA
 
Protein sequence
MTAPHGTPDS LSLSASTTDN PASTAHSRRA LLALGVGSFG IGTGEFVIMG LLPDAARDLA 
ITIPQAGHLI SAYALGVVIG APLLAVLGAR LPRRNLLIAL MAAFAIGNFA SAFAPSYASM
LIARLLTGFP HGTYFGVAAL VAAGLVPRER RGQAVGLVML GLTVATLVGV PIAATVGTWL
GWRAAFMIVG AIGALTAWLV WCWVPFFPAD RKASPLRELT ALRRKQVWLT LGIGAIGFGG
MFAVFSYIKP AMLEVAQMPA SAIPFVLALF GMGMVTGNLV GAKLADKALM PAIGGVLVWS
ALVIGAFTLT APHAWLAAVN VLLIGTVVAL GPALQIRLMD VAGDAQTLAA ALNHSAFNMA
NALGAWLGGV SIAAGLGWTS TGWVGALLAV GGLIVFAWSA LAMQRGGVTM PQAS