| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4481 |
|---|
| Symbol | sucA |
|---|
| ID | 3614654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 1148319 |
|---|
| End bp | 1151153 |
|---|
| Gene Length | 2835 bp |
|---|
| Protein Length | 944 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637693910 |
|---|
| Product | 2-oxoglutarate dehydrogenase E1 component |
|---|
| Protein accession | YP_298675 |
|---|
| Protein GI | 73538308 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACCC TTATGATTCG AGATCGAAAT ACCTCCTTCC TGTTTGGAGG CAATGCCCCG
TATGTGGAAG AACAATACGA GGCGTACCTG AAGGATCGGG CATCGGTGTC CGACGAGTGG
CGCGGCTACT TCGATGCCCT GCAACAGATG CCTGCGGTCG ATGGATCGAC TGCCGGCGAT
GTTGCGCATG GTCCCATCGT GTCCCGCTTT GCCGAGCTGG CAAAAAGTCC ACCGGCGGTC
GGGCATCCTG CGGGCGCTGG CCATGCCTCC GTACGCAAAC ATCTCGCCGT GCAGGCCTTG
ATCGCGGCTT ACCGCATGGT CGGTTCGCGC AATGCGCATC TTGACCCGCT GCGCTGGACG
GTGCGGGTGC CATTGCCGGA GCTGAGCCCT GGCTACTATG GTCTGTTCCG GTCGGACCTG
GATGCCAGGT TCTTGCTGTC CGACGCGAAT TTCGCCGACG AAGACATGAC GCTTCGTCAT
CTGATGCAGG CGCTGGAGGA AACGTATAGC GGCACGCTCG GCGCCGAGTT CATGCACCTT
GCCGATCCGA AGCAGCGCAG CTGGTGGCAG ATGCGTCTGG AATCCACGCG TGCCAGGACC
CACCTGGACG ACGGTAACAA GCGGCACATC CTTGAACGCC TGACGGCAGC GGAGGGACTC
GAAAGGTATC TCCACGCGCG CTACGTCGGG CAGAAGCGCT TTTCGCTCGA GGGCGGCGAA
TCCCTGATCG TATTGCTGGA TGAACTGGTT GCCTATGGGG CCACGCAGGG CATCCGCAGT
GCGATCCTCG GCATGGCGCA TCGTGGGCGG ATCAATGTGC TGGTGAATGT TGTCGGCAAG
CCTCCGGCCG CGCTGTTCGA CGAGTTTGAG GGAAAGACCG CTGACCGGCT GCCGGCCGGC
GACGTCAAGT ATCACAAGGG CTTCACCGGC ACACTGCGGA CGGCATCGGG ACCCGCCGAA
GTGACGCTGG CCTTCAATCC GTCGCATCTG GAGATCGTGA ACCCGGTGGT CCAGGGCATG
GCGAGGGCGC GTGCGGAAGT GCTGGGCCTT GGCATGGGCG CGGTGTTGCC AGTGGAGATC
CATGGCGACG CATCGATCTC GGGGCAGGGT ATCGTCATGG AGACGATGAA CCTCTCCGGT
ACGCGCGGCC ATGGCACCGG AGGCACGGTG CATGTGGTGG TGAACAATCA GGTCGGCTTT
ACCACCTCCG ACCCGCGCGA TGCCCGCTCT ACGTTCTATT GCACCGACAT TGCCAAGATG
ATCGAAGCAC CGGTGCTGCA CGTGAATGGT GATGATCCCG AGGCCGTGGT CGCCGCCACG
CGGCTCGCGG TGGACTATCG CATGACGTTC GGCAAGAGCG TGGTCATCGA ACTGATGTGC
TTCCGGCGGC ACGGTCATCA GGAGCAGGAT ACTCCGGCCA TCACGCAGCC ACTCATGTAC
CGCTCGATCG CGGAGCATCC GGGCGTGCGC GCCATCTATG CGGAAAAGCT CGTCGACGAG
GGCGTTGTAA CCGCGGCGGA TGTGGAACGG TACGCGCGGG AATATCGTGC GCGCCTGGAT
GCCGCGCAGG GCGGCAAAGA CGACAAGCCG TCCGCTGATA TGCGGCTTGA AGCCTCGTCG
CCGCAGGATT CTGGCAACAG CAAGACACAG CCCGGATACG CTACGCCTGG GCGCGAAATG
CTAAAAGGCC TTGCCCTGAA GATCACCGAT ATACCGGCCG GGCATACGCT GCATCCGCTG
GTTGCCCGCG TGATCAGCGC GCGCCGGGAA ATGGCAGAGG GCGCGCGTCC CCTGGACTGG
GGCATGGCCG AGCACCTGGC CTTTGCGTCG CTGCTTTCCG CCGGGGTAGG CGTGCGGTTG
AGCGGGCAGG ACAGCGAACG CGGTACCTTC GGTCATCGCC ATGCCGTGCT CCACGATCAG
AAGCGCGAGA TGCGGGGTCA AGGCACCTAT ATTCCGCTGG ACCATGTATC CGACGACCAG
GCGAGGTTCT CGGTCACCAA TTCCATTCTT TCCGAAGCTG CGGTACTGGC GTTCGAATAC
GGCTATTCGC TGTTCCGGAA GGACTCGCTG GTGCTGTGGG AAGCCCAGTT TGGCGACTTT
GCAAACGGCG CGCAGGTCGT CATCGATAAC TTCCTTTCCG CCGGAGCCGC CAAGTGGGGC
CAGCATAGCG GCGTGACGCT GCTGTTGCCG CATGGCCAGG AAGGGCAGGG TCCGGAACAT
GCTTCGGCAC GGCTTGAACG CTACCTGCAA CTCTGCGCGC AGGAGAATAT GCGCGTGTGC
CAGCCGACGA CGCCGGCGCA GATGTTCCAC CTGCTGCGTT TGCAGGCCAC GCGGAATGAC
CGTATCCCGC TTGTCGTGAT GACGCCGAAG TCGCTGCTGC GGCACCAGGA GGCCGTCAGC
ACCCTGGACG AACTCGCCAC TGGCGAATTC AGGGAGGTTC TGGCTGAGGG CCGCTCCGAG
CAAGAAGAGG ACAGGATCAC CCGCCTCATC CTGTGCTCGG GAAAGGTCTA TTTCGACTTG
CTGGCTCGTC GGCGGAAATC CGGGAAAGAC AACATCGCGC TGCTTCGCGT GGAGCAACTG
TATCCGTTCC CCGAGCAGCA GATTGCCCGG GAGCTTGATC GGTATCCGTA TCTGAAAGAG
GTGATCTGGT GCCAGGAAGA AGCGAGAAAC CAGGGCGCCT GGAGCTTTGT GGTGGAGCGG
CTGCAAGGCA TCGTTGAAGA TCCGCTGGTG CTTCGCTATG TCGGGCCCGA GGCGGCAGCG
TCGACGGCGC CGGGTTATGC GTCGATGCAC GCGGCTCGCC AGGAAAGCAC TCTGCACGAA
GCCATCGATG CGTAG
|
|---|
| Protein sequence | MATLMIRDRN TSFLFGGNAP YVEEQYEAYL KDRASVSDEW RGYFDALQQM PAVDGSTAGD
VAHGPIVSRF AELAKSPPAV GHPAGAGHAS VRKHLAVQAL IAAYRMVGSR NAHLDPLRWT
VRVPLPELSP GYYGLFRSDL DARFLLSDAN FADEDMTLRH LMQALEETYS GTLGAEFMHL
ADPKQRSWWQ MRLESTRART HLDDGNKRHI LERLTAAEGL ERYLHARYVG QKRFSLEGGE
SLIVLLDELV AYGATQGIRS AILGMAHRGR INVLVNVVGK PPAALFDEFE GKTADRLPAG
DVKYHKGFTG TLRTASGPAE VTLAFNPSHL EIVNPVVQGM ARARAEVLGL GMGAVLPVEI
HGDASISGQG IVMETMNLSG TRGHGTGGTV HVVVNNQVGF TTSDPRDARS TFYCTDIAKM
IEAPVLHVNG DDPEAVVAAT RLAVDYRMTF GKSVVIELMC FRRHGHQEQD TPAITQPLMY
RSIAEHPGVR AIYAEKLVDE GVVTAADVER YAREYRARLD AAQGGKDDKP SADMRLEASS
PQDSGNSKTQ PGYATPGREM LKGLALKITD IPAGHTLHPL VARVISARRE MAEGARPLDW
GMAEHLAFAS LLSAGVGVRL SGQDSERGTF GHRHAVLHDQ KREMRGQGTY IPLDHVSDDQ
ARFSVTNSIL SEAAVLAFEY GYSLFRKDSL VLWEAQFGDF ANGAQVVIDN FLSAGAAKWG
QHSGVTLLLP HGQEGQGPEH ASARLERYLQ LCAQENMRVC QPTTPAQMFH LLRLQATRND
RIPLVVMTPK SLLRHQEAVS TLDELATGEF REVLAEGRSE QEEDRITRLI LCSGKVYFDL
LARRRKSGKD NIALLRVEQL YPFPEQQIAR ELDRYPYLKE VIWCQEEARN QGAWSFVVER
LQGIVEDPLV LRYVGPEAAA STAPGYASMH AARQESTLHE AIDA
|
|---|
| |