| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4448 |
|---|
| Symbol | |
|---|
| ID | 3613959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 1109156 |
|---|
| End bp | 1110430 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637693877 |
|---|
| Product | Bcr/CflA subfamily drug resistance transporter |
|---|
| Protein accession | YP_298642 |
|---|
| Protein GI | 73538275 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATGA AGGGCAGCAG AGCTGATGAA CGGGCAGCAC CCGGTGTGCT GACCGCGCAG
AGCGATCCAC AGCCGAAGGC CCTTCCTGGC ATTGCCGCCA TGGCGGCCAT TGCAGCGGGA
TTGTCGATGC TCGGGCAGTT TGCCATCGCG ACCTATCTGC CCGCCTTCGC GATCATGAGC
GATGCGCTGC ACGCGACGAA CGCGCAGGTC CAGCAGTCGC TCACTGCCTA TCTGCTGCCC
TTCGCGCTGA TGCTGCCGTG GCACGGCGCC ATCTCCGATG CCGTGGGCCG CCGGCGGATG
GTTTTGCTCG GTTGTGCGTT GTTCACCATC GGCTCACTGG TCTGTGCCGG GGCCACTGGC
ATCGATATGC TTCACGCCGG GCGGGTACTG CAGGGCATCA GTGCCGGCAT TGGCGTGATC
GTCGGCCGGG CCATGGTGCG CGATGTCTTC GACGGCATGC AGGCCCAGCA GGTCATGGCG
CTGGTCGCGA TGATCTTTGC GCTGGCTCCG GCGATCGCGC CGGTCTGCGG CGGCTGGCTC
TTGCTGTGGA CAGGCTGGCG CAGCATCTTT GTCTTCCTGG CGCTCGTGTC GGCGTCGCTG
CTCGTCGCCT GCTGGCGATG GGTGCCCGAA ACCTTGCCGC CCGCGCGCCG CCATCCGCTT
CATCCCGCTT TGCTGGCGCG CGGCTATGGG TCCATGTTGA CCCATTGGCG CTTTGTCGCG
CTGACGCTCG CGAACGCCGG GGTCAACGTC GGCATCTATG TCTATATCTT TGCCGCGCCC
ACGTTCGTGA CCCGGCATCT CGGGCTTGGT GCGCAGTCGT TCGGCTGGCT ATTCATCCCG
ATCGTAGCGG GGATCATGCT GGGCTCGCTC GTGTCGCATC GCATGGCCGG CAGGATCAGC
CCGGTGCGCA GCGTGCTGCT CGGGCACGCT GTCATGCTGT TCGCCGGCAT ATTGAACATT
GTGCTCACGG CGCTGCACGC CCCGGCCATG CCGTGGGCGC TGATCGCACT GCCCGTCTAC
GGCGCCGGCA TGACCATCAC GCAACCGAGC CTGCAATTGC TGGCGCTCGA TTGTTTCCCG
GAACGGCGCG GGCTCGCATC GAGTGGCTAT GTCACGGTGC AGCAGTTGGG CAATTTCCTG
ATGTCAGCGC TGCTGGTCCC GCTGCTGCTG GATTCGACAG TCAAGCTGGC GGTTTGTATG
GCAGCGCTGC AGTTATTCGG CCTCGCCATG TTCATGGGCG GGCAACGCGA CAGGGCAGTC
GTGGTTTCTT CGTGA
|
|---|
| Protein sequence | MEMKGSRADE RAAPGVLTAQ SDPQPKALPG IAAMAAIAAG LSMLGQFAIA TYLPAFAIMS
DALHATNAQV QQSLTAYLLP FALMLPWHGA ISDAVGRRRM VLLGCALFTI GSLVCAGATG
IDMLHAGRVL QGISAGIGVI VGRAMVRDVF DGMQAQQVMA LVAMIFALAP AIAPVCGGWL
LLWTGWRSIF VFLALVSASL LVACWRWVPE TLPPARRHPL HPALLARGYG SMLTHWRFVA
LTLANAGVNV GIYVYIFAAP TFVTRHLGLG AQSFGWLFIP IVAGIMLGSL VSHRMAGRIS
PVRSVLLGHA VMLFAGILNI VLTALHAPAM PWALIALPVY GAGMTITQPS LQLLALDCFP
ERRGLASSGY VTVQQLGNFL MSALLVPLLL DSTVKLAVCM AALQLFGLAM FMGGQRDRAV
VVSS
|
|---|
| |