| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B3955 |
|---|
| Symbol | |
|---|
| ID | 3614378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 590244 |
|---|
| End bp | 591185 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637693388 |
|---|
| Product | regulatory protein, LysR:LysR, substrate-binding |
|---|
| Protein accession | YP_298155 |
|---|
| Protein GI | 73537788 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCA ACCTGTCGAT GCGTGACATC GAGACCACGC TGGTACTCGC CCGCACGCTG
AATTTCCGTC AGGCGGCCAG CCAACTGCAC CTGTCGCAAT CCGCCTTGTC CACCCAGATC
CTGCGCATCG AGGAATCGCT CGGCGTGCGG CTGTTCGACC GCACCACGCG CACGGTACGG
CTCACCGCGG CTGGCGCGGT GTTCATGCAG CAGGCCGCGC TGCTGCAGGC GGCGTTCCGT
GGTGCGATCG ACGCCGTCAC CGGCATAGCA AGCGCCGAGC GCGGGCAGGT GGCCGTGGCG
GCGCTGCCGT CACTGGCGGC GCGCATGCTG CCGCGCGTGC TGATGGCCTA CCACCGCGCG
CGTCCCGAAG TGGCGCTGAA GGTGTTCGAT ACGCTATCCG GCCCGGCGTT CGACATGGTC
CGCGCTGGCG AGGTCGATTT CGCGCTGACC GCGGCCGATC CGCAGCAGGC CGACCTGCAC
TACGAACCGC TGCTGTCCGA CCGCTTCGTG CTGCTGATCC CGGCCGCGCA CGCGATGGCG
CGCGGCTCGG GCCCGCTACG CTGGGCCGAC ACCGCGAGCG CGCCGCATGT ATCGATGACG
AATCCGAGCA GCGTGCGCCA ATACACGGAA TGGGCCTTCC TGCAAAACCG CATCCGCTTC
CAGCCCGTGT TCGAGGCCGA GCACCTGGCG ACCATCGCGG CAATGGTCGA ATGCGGCTTC
GGCGTCGCCG CGCTGCCGGA GATCGCCGCC GGCACGGTAC GCCAGCCGGG CATCGTCGAG
CGGCTGCTCA CGGCACCCGT AACAGAGCGG TCGATCGGCC TCGTCACCCC GCGCAACCGC
AGCCTGTCGC CGGCGGCGGC TGAATTGGCC GATGCCGTGC GCGTGCACCT GGCCCAGTTC
CGTGAACAGC CGGAGGCAGC CGGCGCCGGG GTGGGCGCAT GA
|
|---|
| Protein sequence | MKINLSMRDI ETTLVLARTL NFRQAASQLH LSQSALSTQI LRIEESLGVR LFDRTTRTVR
LTAAGAVFMQ QAALLQAAFR GAIDAVTGIA SAERGQVAVA ALPSLAARML PRVLMAYHRA
RPEVALKVFD TLSGPAFDMV RAGEVDFALT AADPQQADLH YEPLLSDRFV LLIPAAHAMA
RGSGPLRWAD TASAPHVSMT NPSSVRQYTE WAFLQNRIRF QPVFEAEHLA TIAAMVECGF
GVAALPEIAA GTVRQPGIVE RLLTAPVTER SIGLVTPRNR SLSPAAAELA DAVRVHLAQF
REQPEAAGAG VGA
|
|---|
| |