| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B3587 |
|---|
| Symbol | ftrA |
|---|
| ID | 3613169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 144066 |
|---|
| End bp | 145055 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637693017 |
|---|
| Product | transcriptional activator FtrA |
|---|
| Protein accession | YP_297789 |
|---|
| Protein GI | 73537422 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.116485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAGA ACAAAACGCA AACCCGTGCC AACGGAGGGC TGGTAGCAGT CGTCGTCTAC
GACGGGCTAA GCCTGTTTGA ATACGGCTGC GCCGTGGAAG TATTCGGTCT GCCCAGACCG
GAAATGGGAG ACGAGTGGTA TCGCTTTGCG ACATGTTCGG CCGAGCCTGG AACGTTGCGC
GGAGTGGGCG GTATCCAGGT GCAAGCAGAC GGGGGCCTTG AACTTTTATC GAAGGCCAAG
ACAATCATTG TTCCCGGGTG GCGCAGCATC GATGCCGTTG TGCCGCCGGA GCTTTGCCGT
GCTTTGCAAA AGGCGAACAA GCGCGGAGCG AGGGTTATGT CGATCTGCAC CGGTGCCTTT
GTATTGGCTG CCGCAGGCTT GCTTGACGGC AAGCGGGCGA CTACCCACTG GCGTCACGCG
ACAGCGCTTG CGGAACGGTA TCCGGAAATC CGGGTAGAGG CAGATGTGCT CTACGTCGAT
GCTGGCGATG TCCTGACTTC GGCCGGCAGT GCGGCGGGAA TCGACCTGTG CCTGCACCTG
ATTCGCCGGG ACTTCGGGCC TCGCGCTGCC AATCAGGTCG CACGTCGGCT GGTCATGCCC
CCGCACCGTG AAGGCGGTCA GGCCCAGTAT ATTGCCGAGC CGGTTTCGAA GCGCAGCAGC
GCATCGTTGG CTCCTCTCTT GGACACGGTG CGCGCAACAT TGGGGGAAGA CTGGCCGATT
GTCAGGATGG CAAAACAAGC CGCAATGAGT GGCCGCACCT TCCAGCGCCA CTTCGTCAAC
ATGATGGCCA TGCCGCCTGG TGAGTGGTTG CTGATCGAGC GGATCAGCCG AGCCAGGGTG
TTGCTCGAAG AAACCGGATT ATCGATGGAT GACATCGCGG TGCAGGTGGG CTTTGGTGCC
GCAGCCACGT TGCGCAATCA TTTTCGCACC CGGCTTGGAA CAAGTCCTGG ATACTACCGG
CGGCGTTTCA GCGCGTCAGA CGAGCACTGA
|
|---|
| Protein sequence | MSKNKTQTRA NGGLVAVVVY DGLSLFEYGC AVEVFGLPRP EMGDEWYRFA TCSAEPGTLR
GVGGIQVQAD GGLELLSKAK TIIVPGWRSI DAVVPPELCR ALQKANKRGA RVMSICTGAF
VLAAAGLLDG KRATTHWRHA TALAERYPEI RVEADVLYVD AGDVLTSAGS AAGIDLCLHL
IRRDFGPRAA NQVARRLVMP PHREGGQAQY IAEPVSKRSS ASLAPLLDTV RATLGEDWPI
VRMAKQAAMS GRTFQRHFVN MMAMPPGEWL LIERISRARV LLEETGLSMD DIAVQVGFGA
AATLRNHFRT RLGTSPGYYR RRFSASDEH
|
|---|
| |