| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B3503 |
|---|
| Symbol | |
|---|
| ID | 3614886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 40847 |
|---|
| End bp | 43966 |
|---|
| Gene Length | 3120 bp |
|---|
| Protein Length | 1039 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637692933 |
|---|
| Product | heavy metal efflux pump CzcA |
|---|
| Protein accession | YP_297705 |
|---|
| Protein GI | 73537338 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3696] Putative silver efflux pump |
|---|
| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0796424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCGC GTATCGTCAA TTTTGCCCTG CACCAGAAGC TGTTTGTCTG GCTGGGCCTG
CTGATCTTTG TGGGCGGCGG CCTGGCCGCG TTCAAGAACC TGCCGATCGA GGCCTTCCCG
GATGTGTCCG ACATCCAGGT CAACATCATC ACGCTCTACC CCGGGCGCGC GGCCGAAGAA
GTGGAGCGCC AGGTGACCAT CCCGATCGAA ACCGCGATGG CCGGCACGCC GAATTCGGTG
CGCGTGTTCT CGCACACGCA GTTCGGCCTG TCGTTCATGA TGGTGACCTT CAACGACAAG
GCCACCGACG TGACCGCGCG CCAGCAGATC CTGGAACGCC TGCGCGGCGT GGACCTGCCG
GACGGGGTGC ATCCCGACCT GGCGCCGCTG TCCACGGCAA TCGGCGAAAT TTACCGATTC
CGACTGACCG GCAAGGGCTA CACCGCGCAG GAACTGCGTA CGCTGCAGGA CTGGGTGGTC
GAGAAGAACC TGCGCCAGGT GCCTGGCGTG GCCGACCTGG TGACCATTGG CGGCACTACC
AAGCAGTATG AGGTGAACCC GAACCTGGCG CGCATGCGCG ACGCCAAGAT CTCCCTGTCG
CAGCTGTTCA CCGCGCTGCA GCGCGCCAAC TCCAACGCGG GCGGCGGCGC CGTGGCACAC
GGCCGACAGC AGTTCCTGCT GCGTTCGCTG GGCAGCTTCC GTACCTCGGC CGACATCGCT
AACGTGGTGG TGGCGGAGAA CAACGGCACG CCGATCCTGG TCAAGGACAT CGCCGATGTG
AAGATCGGCG CGGCGCCGCC GCAGGGCCTG ATGGGGCAGG ACGATGAAGA CGACATCGTC
TCGGGCATCG TGGTGATGCG CAAGGGCGAG AACCCGTCGC TGGTGCTCGA AGCGCTCAAG
AAGAAGATCG AGCTGCTCGA CGACCAGATC CTGCCCAAGG GCGTGAAGAT CGTGCCGTAC
TACGATCGCT CCACGCTGAT CGACAAGACG CTGCACACGG TGTTCGGCAA CCTGGTCGAA
GGCGCGCTGC TGGTGATGGC GGTGCTGTAC CTGTTCCTCG CCAACGTGCG CGCGGCGGCC
ATCGTCGCGC TGGTGATCCC GCTGGCGCTG CTGTCGACGT TCATCGGGCT GACGTGGGTC
GGCATCCCGG CCAACCTGCT GTCTTTGGGC GCGATGGACT TCGGTATCAT CGTCGACGGC
GCGGTGATCG TGGTCGAGAA CATCTTCAAA CGCCTCGGCG AACTGAAGGA ACAGCAGATC
CAGGACAGCA AGGCGCGGCT CTACGCGATC CTGCAGGCCA CGACCGAAGT CGGCCGTCCG
ACCGTGTTTT CGATGGTGAT CATCATCGCC GCGCACATCC CGATCTTCAC GCTGCAACGG
CATGAAGGGA AGATCTTCGC GCCGATGGCC TACACCGTGA CCGGTGCGCT GGTCGGCTCG
CTGATCATCT CGCTGACGCT GGTGCCGCTG CTGTGCCACC TGCTGCTGAA GAAGAACATC
GCCCACGACG ACAACTTCGT GGTGCGCCAT TGCAAGCGGG TGTACGAGCC GATGCTGGCC
TGGGCGCTCG ACCACAAGAA GATGGTGGTC GGCGTGGCGC TGGGTTTGCT GGTGGCGACC
GTGGGCGTAG GCAAGTTCCT GGGCAGCGAA TTCCTTCCCG AACTCGACGA AGGTTCGATG
TGGGTCAGCT TCGACCTGCC GGCCTCGGTT TCGATCGACG AGGCACGCGA CCAGGCGCGC
AAGCTGCGCG GTGTGATCCG TAAGACGCCG GAAGTCAACA CCACGATTTC CAAGGTGGGA
CGTCCCGATG ACGGTACCGA TCCGAAGCTG ATCAATACCG TGGAAATTCT TGTCGACCTG
AAGAACGACA AGCAATGGCG CGCGGGCTAC GACAAGCGCA AGATCATCGA GGAGATCAAC
CACAACTTGC GGCAGCTGCC GGGCATCGAG CCCAATTTCT CGCAGCCAGT GCGTGACAAC
ATCCTCGAGT CGATCTCGCA GATCAAGGGT CAGATCGTCA TCAAGGTGCA GAGCGACAGC
CTGCAGCACA ACAAGCAGGT GGCGGACCAG ATTCTCGCCA ACGTGCAGTC AGTCAAGGGC
GTGATGCGTG CGTTCATCGA CCGTGACGGC GAACTGCCGC AGTACGTGCT CGAGTTCGAT
CGTGCCCAGG CTGCGCGCTA CGGCATCAAC GTGGCCGATG TGCAGGACCT GATGGAAACC
GCGCTGGCCG GCAAGGCTGC GACGGAGCTG TGGGAAGGGG AAAAGCACTT CAGCGTCGCT
GTGCGCCTGA AGCCGTCGGA GCGCGAGTTG CCGAACCTGC CGAACATCTT CATGCAGACC
GCCGATGGCG CGCAGGTCCC GTTGTCGCAG CTGGTGACGT TCCGTGCCGC CTCCGGCGCC
ATGAACATCA GCCGCGAAAA CGGCCAGCGC ACGACGTCGA TCGGCATCTT CATCCACGAC
CGCGACATGG GCAGTGTGGT GAAAGACATG CAGGCCCTGG TCAAGAAAAA CGTGAATGCT
GAAGACGTCA AGATCAGTTG GTCGGGCGAG TTCGAGAACC AGGAGCGCGC CATGGCACGG
CTGTCGATCG TGGTGCCGTT GTCGGTGCTG GTGATCTTCC TGCTGCTGTT CAATGCGTTC
AAGTCGTTCA AGAGCGCCAC GCTGATCATC TCGAACATTC CGTTCGCGCT GATCGGCGGC
GTGTTCGCGC TGTTCCTGAC GGGCATTCCG CTGTCGGTGT CGGCGGCCAT CGGGTTTATC
GCGCTCTTCG GGCAGGCCGT GCTGAACGGG GTGGTGATGG TGACCTACTT CAACCAACTG
CGCGATGAAG GCATGCCGGT GCGCCAGGCC GTGCTGACCG GATCCATGGA CCGGCTGCGC
ACGGTGCTGA TGACGGCGCT GCTGGCCATG CTTGGTCTCT TCCCGATGGC GATTTCTCGC
GCCATCGGCG CGGAAACCCA GCGGCCGCTG GCGATCGTGA TCATCGGTGG CCTGATTACC
GCCACGATGC TGACGCTGAT CGTGCTGCCC ACGCTGTATG AATGGATGGT CGGAAGAAAC
TGGCCGGACG AGGAAGTCGA CGAGCCGAAC AACCGGTTGT CGGATTCGCT GTCATCCTGA
|
|---|
| Protein sequence | MISRIVNFAL HQKLFVWLGL LIFVGGGLAA FKNLPIEAFP DVSDIQVNII TLYPGRAAEE
VERQVTIPIE TAMAGTPNSV RVFSHTQFGL SFMMVTFNDK ATDVTARQQI LERLRGVDLP
DGVHPDLAPL STAIGEIYRF RLTGKGYTAQ ELRTLQDWVV EKNLRQVPGV ADLVTIGGTT
KQYEVNPNLA RMRDAKISLS QLFTALQRAN SNAGGGAVAH GRQQFLLRSL GSFRTSADIA
NVVVAENNGT PILVKDIADV KIGAAPPQGL MGQDDEDDIV SGIVVMRKGE NPSLVLEALK
KKIELLDDQI LPKGVKIVPY YDRSTLIDKT LHTVFGNLVE GALLVMAVLY LFLANVRAAA
IVALVIPLAL LSTFIGLTWV GIPANLLSLG AMDFGIIVDG AVIVVENIFK RLGELKEQQI
QDSKARLYAI LQATTEVGRP TVFSMVIIIA AHIPIFTLQR HEGKIFAPMA YTVTGALVGS
LIISLTLVPL LCHLLLKKNI AHDDNFVVRH CKRVYEPMLA WALDHKKMVV GVALGLLVAT
VGVGKFLGSE FLPELDEGSM WVSFDLPASV SIDEARDQAR KLRGVIRKTP EVNTTISKVG
RPDDGTDPKL INTVEILVDL KNDKQWRAGY DKRKIIEEIN HNLRQLPGIE PNFSQPVRDN
ILESISQIKG QIVIKVQSDS LQHNKQVADQ ILANVQSVKG VMRAFIDRDG ELPQYVLEFD
RAQAARYGIN VADVQDLMET ALAGKAATEL WEGEKHFSVA VRLKPSEREL PNLPNIFMQT
ADGAQVPLSQ LVTFRAASGA MNISRENGQR TTSIGIFIHD RDMGSVVKDM QALVKKNVNA
EDVKISWSGE FENQERAMAR LSIVVPLSVL VIFLLLFNAF KSFKSATLII SNIPFALIGG
VFALFLTGIP LSVSAAIGFI ALFGQAVLNG VVMVTYFNQL RDEGMPVRQA VLTGSMDRLR
TVLMTALLAM LGLFPMAISR AIGAETQRPL AIVIIGGLIT ATMLTLIVLP TLYEWMVGRN
WPDEEVDEPN NRLSDSLSS
|
|---|
| |