Gene Reut_A3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A3372 
Symbol 
ID3610405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp3691585 
End bp3693204 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content66% 
IMG OID637692798 
Productglucose-methanol-choline oxidoreductase:FAD dependent oxidoreductase:GMC oxidoreductase 
Protein accessionYP_297574 
Protein GI73543054 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGACCT TCGACTACAT CATCGTGGGC GCCGGCTCGG CCGGCTGCGT GCTGGCCAAC 
CGCCTCACGC AGGACGCGGA TGTCAATGTG CTGCTGCTCG AGGCGGGCGG CAAGGACGAT
TATCACTGGA TCCATATTCC GGTCGGCTAT CTCTATTGCA TCGGCAATCC GCGCACGGAC
TGGCTGTATC GCACGGTTGC GGAGAAGGGG CTCAACGGCC GTTCGCTCGG TTATCCGCGC
GGACGTGTGC TCGGGGGCTC GTCGTCGATC AACGGCATGA TCTATATGCG CGGTCAGCGC
GAGGACTATG ACGACTGGGC ACGCCTGAGC GGCGACGACG GCTGGCGCTG GGACAACGTG
CTGCCACTGT TCAAGCGCAG CGAGGACCAC CATCGCGGCC CCAGCGAATT CCATGGCGCC
GGCGGCGAAT GGCGTGTGGA AGCGCAGCGC CTGCGCTGGG ACATCCTTGA ACGCTTTATC
GACGCCGCCG AGCAGGCCGG CATTCCGCGC ACCGACGACT TCAACCGTGG CGACAACTTC
GGCGTGGGGT ATTTCGAGGT CAACCAGCGC CGCGGCATCC GCTGGAATAC GTCCAAGGCT
TTCCTGCGGC GTGCGGCGGA CCGGCCGAAT CTGACTATCG TGACGGGGGC GCAAGTCAGT
GCGCTGACTT TCGAAGGGCG ACGCTGCACG GGCGTGAACT ACGTCGGTGG CGGGCAGGCG
CACAGCGCGG CGGCGCGGCA CGAAGTGATC CTGGCCGCGG GCGCAGTCAA CACGCCGCAA
TTGCTCGAGT TGTCAGGCAT CGGGCAGGGC GAGCGCCTGC AGGCCCTGGG TATTCAGGTG
CGGCATGCAT TGCCGGGCGT GGGCGAGAAC CTGCAGGACC ACCTGCAGTT GCGCACCGTG
GTCAAGGTCA ATGGTGTGCG CACGCTGAAT ACGCGCGTGG CGAGTTGGTG GGGCAAGCTC
GGCATCGGGC TGGAATACGC ATTCAACCAG AGCGGGCCGA TGAGCATGGC GCCATCGCAA
CTTGGCGCGT TCGCGCGCTC GGATGCGTCG CAGGCGCGGC CAAACCTGGA GTACCACGTT
CAACCGCTGT CGCTCGACAA GTTCGGCGAG CCGCTGCACG CGTTCAACGC ATTCACGGCC
AGCGTCTGCA ACCTGCGCCC GACCTCGCGC GGCAGCGTCC ATATCGATAG CGCTGATTTC
CGGCAGGCGC CGGTGATCGC GCCCAACTAT CTGTCGACGG ACGAGGACCG CAAGGTTGCA
GCCGATTCGT TGCGGCTCAC GCGTCGTATC GTGGCGTCGC CCGCCCTGGC GCCGTATCGC
CCGGAGGAGT GGTTGCCCGG CCCTGGCTTC GAGACGGACG AAGCGCTGGC CGAGGCCGCG
GGCAATATCG GCACCACGAT CTTCCATCCG GTCGGCACAT GCCGCATGGG CCGCCCGGAC
GATCCGCTTG CCGTCGTGGA TCACCGGCTG CGCGTACATG GGATCGAGGG ACTTCGCGTG
GTCGATGCCT CGGTCATGCC GCTGATTACA TCGGGCAACA CCAATTCGCC GACCATCATG
ATTGCCGAGC GGGCGAGCGA CATGCTGCGC GAGGAGCGCC GCCAGCAACT CGCTGCATGA
 
Protein sequence
METFDYIIVG AGSAGCVLAN RLTQDADVNV LLLEAGGKDD YHWIHIPVGY LYCIGNPRTD 
WLYRTVAEKG LNGRSLGYPR GRVLGGSSSI NGMIYMRGQR EDYDDWARLS GDDGWRWDNV
LPLFKRSEDH HRGPSEFHGA GGEWRVEAQR LRWDILERFI DAAEQAGIPR TDDFNRGDNF
GVGYFEVNQR RGIRWNTSKA FLRRAADRPN LTIVTGAQVS ALTFEGRRCT GVNYVGGGQA
HSAAARHEVI LAAGAVNTPQ LLELSGIGQG ERLQALGIQV RHALPGVGEN LQDHLQLRTV
VKVNGVRTLN TRVASWWGKL GIGLEYAFNQ SGPMSMAPSQ LGAFARSDAS QARPNLEYHV
QPLSLDKFGE PLHAFNAFTA SVCNLRPTSR GSVHIDSADF RQAPVIAPNY LSTDEDRKVA
ADSLRLTRRI VASPALAPYR PEEWLPGPGF ETDEALAEAA GNIGTTIFHP VGTCRMGRPD
DPLAVVDHRL RVHGIEGLRV VDASVMPLIT SGNTNSPTIM IAERASDMLR EERRQQLAA