Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_A3342 |
Symbol | hemE |
ID | 3612047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007347 |
Strand | - |
Start bp | 3659911 |
End bp | 3661002 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637692768 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_297544 |
Protein GI | 73543024 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCAC TGCAGAACGA CACTTTCCTG CGCGCACTGC GCCGGCAGCC GACCGAATAC ACGCCGCTGT GGCTGATGCG CCAGGCAGGC CGCTACCTGC CTGAGTACAA CGCCACGCGC GCGCGCGCGG GCAGCTTTCT GGGCCTGGCC AAAAATCCAG CCTATGCCAC CGAAGTGACG CTGCAGCCGC TGGACCGCTA TCCGCTGGAC GCGGCCATCC TGTTCTCCGA CATCCTGACC GTGCCCGACG CCATGGGCCT CGGCCTGTCG TTTGCCCAGG GCGAAGGCCC GCGCTTCGCG CGGCCGCTGC GTACCGAAGC CGACGTGCAG AAGCTTGCCG TGCCCGACAT GGCATCACTG CAGTATGTGT TCGACGCCGT GGCCGAGATC CGCCGCGCGC TGGTCCAGGA CGGGCGCCAG CGCGTGCCGC TGATCGGCTT CTCGGGCAGC CCGTGGACGC TGGCTTGCTA CATGGTCGAA GGCGGCGGCT CGGACGACTT CCGCACGGTC AAGGCGATGA TGTACGGCCG GCCGGACCTG ATGCACCGCA TCCTCGACAT CAATGCGCAG GCGGTCAGCG AGTACCTGAA TGCACAGATC GAGGCAGGCG CGCAGGCCGT CATGATCTTC GACACCTGGG GCGGTGCGCT GGCTGACGGC ATGTACCAGG CGTTCTCGCT GGCCTATATG CGCAAGGTAC TCGCCGGCCT GAAGCGCGAG CATGACGGAC AGCAGATCCC CGCGATCGTC TTCACGAAGG GTGGCGGCCT GTGGCTGGAA GGCCTCGCCG ACACCGGCGC CGACGCCATT GGTTTGGACT GGACGGTCAA CCTTGCGCAA GCGCGCCGAC GCACCGGTGG CCGCGTGGCG CTGCAGGGCA ATATCGATCC GACAGTGCTG TTCGCCCCCG AAGCGGCGAT TCGGGAACAG GTGCGGGGCG TGCTCGACAG CTATGCGGCA GCGGGCGGTA GCGACGGTCA TGTGTTCAAC CTCGGCCACG GTATTTCGCA GTTCACGCCC CCGGAAAGCG TGGCGGTGCT CGTCGACGAA GTGCATCGCT ATAGCCGCCA GCTGCGCACG TCGCAGGGCT GA
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Protein sequence | MTALQNDTFL RALRRQPTEY TPLWLMRQAG RYLPEYNATR ARAGSFLGLA KNPAYATEVT LQPLDRYPLD AAILFSDILT VPDAMGLGLS FAQGEGPRFA RPLRTEADVQ KLAVPDMASL QYVFDAVAEI RRALVQDGRQ RVPLIGFSGS PWTLACYMVE GGGSDDFRTV KAMMYGRPDL MHRILDINAQ AVSEYLNAQI EAGAQAVMIF DTWGGALADG MYQAFSLAYM RKVLAGLKRE HDGQQIPAIV FTKGGGLWLE GLADTGADAI GLDWTVNLAQ ARRRTGGRVA LQGNIDPTVL FAPEAAIREQ VRGVLDSYAA AGGSDGHVFN LGHGISQFTP PESVAVLVDE VHRYSRQLRT SQG
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