Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_A3006 |
Symbol | |
ID | 3612012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007347 |
Strand | - |
Start bp | 3302354 |
End bp | 3303940 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637692417 |
Product | extracellular solute-binding protein |
Protein accession | YP_297210 |
Protein GI | 73542690 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.165169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTTC GCACAATCAA GAAGGCATTT GGTGCTGTCG CGGTAGCCGG GGCCATGAGC CTTGTGCTGG CCGGCGCGGC ACAGGCCGCT GACCTCAAGC TTGCCATGAG TTCGCCGCCG ACCTCGATGG ATCCGCACTT CTACAATCTG TTTTCGAACA TCAACGTGTC TGAACACGTG TTCGAGACGA TGATCAAGAT GGACCCCGAC AGCCGCATCA TTCCCGGCCT CGCGGAGTCG TGGAAGATGA TCAACAACCT GACCTGGGAA TTCAAGATCC GCAAGGGCGT GAAGTTCCAT GACGGCTCCG AGCTGACCAC CGAGGACATC GTCTGGTCGC TGGACCGGCC GGCCACCATT CAGAACAGTC CCGGCAAGTT CGACGTCTAC ACCAAGGCGA TCATCAACAA GAAGGTGATC GACAAGTACA CCATCCAGCT CACTACCAAC CAGCCGTATC CGCTCATGCT GAACGACCTC ACGTCGATCT TCGTCGTGCA GAAGAAGGCC ACGCAAGGGT TGAGTTCGGA TGACTTCGCC CAGGGCAAGG GCATGATCGG CACCGGCCCG TTCAAGTTCG TGAGCTACGC GCGCGACGAC CGGGTCGAAC TGGTGCGCAA TCCCGATTAC TGGGGCCCGA AGCCCGCGTG GGACAAGGTG ACGCTGCGCT TCATTCCCAA TCCGGCCACG CGCCTCGCGG CGCTGCTGTC CGGTGATGTG CAGGCGATCG AGAACGTGCC GACGCCGGAT CTGCCGAAGG TGCGCAACGA TCCCAAGTTG TCGTTCTTCT CCAAGATTTC GCACCGCGTG ATCTACCTGT ACTTCGATGC CAAGCGTGAC AAGTCGCCGT ACGTCACGAC CAAGGAAGGT CAGCCGATGG ACAAGAACCC GCTGAAGGAT GCGCGCGTGC GCAATGCCAT CAGCATGGCC ATCAACCGGC AGGGCATCAA GGACCGACTG ATGGAAGGCC TGTCCGAGCC GACCAACAAT CTCGTGCCGC CCACGCTGTT CGGTTATAAC CCGAACCTCA AGACGGTCAA GTACGATCCC GAGGGCGCGA AGAAGCTGCT CGCGGAAGCG GGGTATCCGA ATGGCTTTGG CGTGACGCTG CACACGCCTA ACAACCGCTA CGTCAACGAC GAGAAGATTG CGCAGACCAT CGCGCAGAAC CTCACGCGCG TCGGCATCGC GACGAAGGTG GAAGGCATGC CGATGGCGAC GTATTCGTCC AAGGGCATCA AGCACGAATG GTCGTTCGGC TTGCTCGGCT GGGGCGCACA GACCGGAGAA GTCAGCTCGC CGCTGCGCGC GCTGCTGGCG TGCGAGGACA GCAAGAAGGG CTTCGGCACC ACTAACTGGG GCGAATATTG CAATCCGAAG ATGGATGTGG TGCTGGAGAA GGCGCTGGCC ACGGTCGATG ACAACGAGCG TTCCAAGCTG CTGCAGGAAG CCACTGCCAT TGCTATCAAC GACGGCGGTA TCATCCCGAT CCACCAGCAG GTGACCACCT GGGCCACGCA GAAGGGTATC GTCTATATTC CGCGCACCGA CGAACGCACC TATGCGCACA ACTTCAAGCC GCAGTAA
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Protein sequence | MSLRTIKKAF GAVAVAGAMS LVLAGAAQAA DLKLAMSSPP TSMDPHFYNL FSNINVSEHV FETMIKMDPD SRIIPGLAES WKMINNLTWE FKIRKGVKFH DGSELTTEDI VWSLDRPATI QNSPGKFDVY TKAIINKKVI DKYTIQLTTN QPYPLMLNDL TSIFVVQKKA TQGLSSDDFA QGKGMIGTGP FKFVSYARDD RVELVRNPDY WGPKPAWDKV TLRFIPNPAT RLAALLSGDV QAIENVPTPD LPKVRNDPKL SFFSKISHRV IYLYFDAKRD KSPYVTTKEG QPMDKNPLKD ARVRNAISMA INRQGIKDRL MEGLSEPTNN LVPPTLFGYN PNLKTVKYDP EGAKKLLAEA GYPNGFGVTL HTPNNRYVND EKIAQTIAQN LTRVGIATKV EGMPMATYSS KGIKHEWSFG LLGWGAQTGE VSSPLRALLA CEDSKKGFGT TNWGEYCNPK MDVVLEKALA TVDDNERSKL LQEATAIAIN DGGIIPIHQQ VTTWATQKGI VYIPRTDERT YAHNFKPQ
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