| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2978 |
|---|
| Symbol | murC |
|---|
| ID | 3612375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 3266286 |
|---|
| End bp | 3267713 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637692389 |
|---|
| Product | UDP-N-acetylmuramate--L-alanine ligase |
|---|
| Protein accession | YP_297182 |
|---|
| Protein GI | 73542662 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
|---|
| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.680474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATA TCGTCAAAAA CATCCACTTC GTAGGCATCG GCGGCGCCGG CATGAGCGGC
ATCGCGGAGG TCCTGCTGAA CCTGGGCTAC AAGGTCTCGG GTTCCGATGT GGGCAGCAAC
GCCGCCACGC GGCGCCTGGC TTCGCTCGGT GCCACGGTCA TGCACGGGCA TGACGCGGCG
AACATCGCCG GTGCGAACGC CGTGGTGGTT TCCACGGCCG TGAGCGGGGA CAACCCCGAA
GTGCTGGCCG CCCGCAGCAA GCGTATCCCG GTGGTGCCGC GCGCGGTGAT GCTGGCCGAG
TTGATGCGCC TGAAGCAGGG CGTCGCCATT GCCGGCACGC ACGGCAAGAC CACGACCACG
AGCCTGGTGG CGTCGGTGCT GGCCGAGGGC GGGCTCGACC CGACCTTCGT GATCGGCGGC
CGCCTGAATT CCGCGGGTGC TAATGCGCGC CTGGGCACGG GCGATTTCAT CGTGGCCGAA
GCCGATGAAT CCGATGCCTC GTTCCTGAAC CTGTTCCCGG TCATCGAAGT CATCACGAAC
ATCGATGCCG ACCACATGGA CACCTACGGG CACGACTTCG CTCGGCTCAA GCAGGCGTTC
ATCGAATTCA CGCAGCGCCT GCCGTTCTAC GGCATCGCCG TGCTGTGCGT GGACGATCCG
AACGTGCGCG AGATTCTGCC ATTCGTGTCC AAGCCTGTCG TGCGCTATGG CTTTGCCGAG
GATGCACAGA TCCGCGCTGT CAATGCGCGC GCAGTCGATG GCCAGATGCA TTTCACCGTG
CTGCGCCACC TCAACGGCCA TGCCGAACCG CCACTCGACG TGGTGCTGAA CCTGCCCGGC
CTGCACAACG TGCAGAACGC GCTGGCCGCG ATCGCGATTG CGACGGAACT GGAAGTCCCG
GACGCCGCGA TCGTCAAGGC GCTGCGCGAG TTCCACGGCG TAGGACGCCG CTTCCAGCGC
TACGGCGAAG TGGCCACGGC GGATGGCACC GGCACGTTCA CGCTGGTCGA CGACTACGGG
CACCACCCGG TGGAAATGGC CGCTACGCTC TCCGCCGCGC GCGGCGCGTT CCCGGGCCGC
CGCCTGGTGC TGGCGTTCCA GCCGCACCGT TTCACGCGCA CGCGCGATTG CTTCGAGGAT
TTCGTCAAGG TGCTCGGCAC CGTTGATGCG TTGTTGCTGG CCGAGGTCTA TGCCGCCGGC
GAAGCGCCGA TCGTCGCGGC CGATGGCCGC GCGCTGACCC GTGCGCTGCG CGTGGCGGCC
AAGGTAGAAC CTGTTTTCGT GGAGCAGATG GAAGAGATGC CGCAGGCCAT CATGAATGCC
GCCAGGCCTG GCGACGTGGT CGTAACGATG GGAGCCGGCT CGATCGGCGC GGTACCGGGA
CAGGTGGTCT CGCACCAGCA GCCGCTGCAG GCGGGAGGTG CGGCATGA
|
|---|
| Protein sequence | MKHIVKNIHF VGIGGAGMSG IAEVLLNLGY KVSGSDVGSN AATRRLASLG ATVMHGHDAA
NIAGANAVVV STAVSGDNPE VLAARSKRIP VVPRAVMLAE LMRLKQGVAI AGTHGKTTTT
SLVASVLAEG GLDPTFVIGG RLNSAGANAR LGTGDFIVAE ADESDASFLN LFPVIEVITN
IDADHMDTYG HDFARLKQAF IEFTQRLPFY GIAVLCVDDP NVREILPFVS KPVVRYGFAE
DAQIRAVNAR AVDGQMHFTV LRHLNGHAEP PLDVVLNLPG LHNVQNALAA IAIATELEVP
DAAIVKALRE FHGVGRRFQR YGEVATADGT GTFTLVDDYG HHPVEMAATL SAARGAFPGR
RLVLAFQPHR FTRTRDCFED FVKVLGTVDA LLLAEVYAAG EAPIVAADGR ALTRALRVAA
KVEPVFVEQM EEMPQAIMNA ARPGDVVVTM GAGSIGAVPG QVVSHQQPLQ AGGAA
|
|---|
| |