| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2961 |
|---|
| Symbol | |
|---|
| ID | 3608983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 3247163 |
|---|
| End bp | 3248437 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637692372 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_297165 |
|---|
| Protein GI | 73542645 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1459] Type II secretory pathway, component PulF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGC GCGCACCAGC TGCGAGCGCA CGGGCGGCAG TGCCGCCACG CGCGAAGGCA
GGACGAGCAG GACGTAAAGC ACCCACGCAG TACATCTTCG AGTGGGAAGG CAAGGACCGC
AAAGGCAAGA CGTTCACCGG GGAACAGCGG GCCGAAAACC AGGCCGAGGT CACGGCGGCG
CTGCGCAAGC AGGGCCTCAC GGTGGTCAAG CTCAAGAAGC GCAAGGCCGC GCGCGGCAAG
AAGATCACCG AGAAGGACAT CGCGTATTTC ACGCGCCAGC TTTCGACCAT GCTGAAGGCC
GGCATTCCGC TGCTGCAGTC GATCGACATC ATCGCGCGCG GGCACGCCAA TCCGAACTTC
ACGCAGCTGC TGTCCGACAT CCGCTTCGAC ATCGAATCCG GCAGCAGCAT GGCGGCGGCG
TTCCGACGCC ATCCGCGCTA CTTCGACACG CTGTACTGCA ACCTGATCGA CGCCGGCGAG
CAGGGCGGTA TTCTCGACTC CCTGCTCGAG CGCCTGTCGC TCTACATGGA AAAGACCATC
GCGCTGAAGA GCCAGATCAA GTCCGCGATG ATCTACCCGA TCGCGGTGCT GACCGTGGCC
TTTGCCGTGA CGGTGATCCT GATGCTGTTC GTGATCCCGG CGTTCAAGGG CGTGTTCTCG
AGCTTCGGCG CGAACCTGCC GGCGCCGACG CTGGTCGTGA TCGCCATCTC GGACTTCTTC
GTCGCGTACT GGTACATCGT CATCGGCATA CCGGTGGGGG CAATCGCGTT CTATTTACGG
GCCTTGAAGA AATCCGAGAA GGTCCAGCGC ACCACGGACC GCATAATGCT GAAGCTGCCC
ATTTTCGGCA GCCTCTTCCG CAAGGCCGTG ATCGCGCGCT GGACGCGTAC GCTCGCCACC
ATGTTCGCGG CGGGTACGCC GCTGGTGGAA TCGATGGAAT CCGTGGCCGG CGCGGCGGGC
AACTGGGTCT ACTACGACGC CACGCGCGAG ATCGAACAGT CCGTGCGCAT CGGTACCAGC
CTGACCAACG CCATGCAAGC CACGCACGTG TTCGACAACA TGGTGCTGCA GATGACGCAG
ATCGGCGAGG AATCGGGCGC GCTGGACAAT ATGCTCATCA AGGTGGCGGA GTTCTACGAG
CGCGAGGTCG ATGACGCCGT GGCGGCCATT TCGAGCCTGA TCGAGCCGCT CATCATCGTG
GTGCTGGGCG TGCTCATCGG CGGTATGGTG GTGGCAATGT ACCTGCCGAT CTTCAAGCTG
GGACAGGTGG TGTAA
|
|---|
| Protein sequence | MATRAPAASA RAAVPPRAKA GRAGRKAPTQ YIFEWEGKDR KGKTFTGEQR AENQAEVTAA
LRKQGLTVVK LKKRKAARGK KITEKDIAYF TRQLSTMLKA GIPLLQSIDI IARGHANPNF
TQLLSDIRFD IESGSSMAAA FRRHPRYFDT LYCNLIDAGE QGGILDSLLE RLSLYMEKTI
ALKSQIKSAM IYPIAVLTVA FAVTVILMLF VIPAFKGVFS SFGANLPAPT LVVIAISDFF
VAYWYIVIGI PVGAIAFYLR ALKKSEKVQR TTDRIMLKLP IFGSLFRKAV IARWTRTLAT
MFAAGTPLVE SMESVAGAAG NWVYYDATRE IEQSVRIGTS LTNAMQATHV FDNMVLQMTQ
IGEESGALDN MLIKVAEFYE REVDDAVAAI SSLIEPLIIV VLGVLIGGMV VAMYLPIFKL
GQVV
|
|---|
| |