| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2647 |
|---|
| Symbol | |
|---|
| ID | 3611286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 2903178 |
|---|
| End bp | 2904557 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637692057 |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_296852 |
|---|
| Protein GI | 73542332 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCC GCGAACAGCT TGCCGGCGCC GGCCCTGCCT TTACGACCAA TGGCCATGCC
GCGATCCAGT TCACGACCGG AGCGCCAGTC AGCACCACCG CGTCACCGGG CTACCATGCC
CTCAAGCGCG AGGTGCACGA AGTCGTCCTG GACCGCGTGG AACTGGAGCG CCTGGCGCGT
TTTCCGCAAG AACAGGTGAG ACAGGAAATC TCTACGCTGG TGAACCTGAT CATCGACGAG
CAAAGGGTTC TGCTCAACGA CAACGAACGA CGCCAGCTGA CGGTCGAGAT CTACGACGAA
ATGTTCGGCT TTGGCCCGCT GGAGCCACTG CTGAAGGACC CGACGGTTTC AGACATCCTG
GTCAACACCG GGCGCCAGAC CTATGTGGAG CGGCGCGGCA AGCTCGAACT GACCGACGTC
GTGTTCTATG ACGATGCGCA CCTGATGAAG GTGATCGAGA AGATTGTCTC GCGCGTGGGC
CGCCGCATCG ACGAGACGAG CCCGATGGTG GACGCGCGCC TGCCGGATGG ATCGCGCGTC
AACGCCATCA TTCCGCCATC CGCCATCGAC GGACCCCTGC TCTCGATCCG CCGCTTTTCC
GTCAATCCGC TTCAGGTGTC GGACCTCGTG GAACTGCGCA GCCTGACGCC GCCGATGGCG
CAGATGCTGC AGGCATTGTC GAAGGCCAAG GTCAACGTGC TGGTGTCGGG AGGCACCGGC
AGCGGCAAGA CCACGCTGTT GAACATCCTC TCGGGCTTCA TCCCCGAGGA CGAACGCGTG
ATCACCATCG AGGACGCCGC CGAACTGCAA CTGCGCCAGC CTCATGTGCT GCGGCTGGAA
ACGCGTCCGC CCAACATCGA GGGCAAGGGA GAGATCACGC AGCGTGCGCT GGTGCGCAAC
GCGCTGCGGA TGCGCCCGGA CCGCATCATC CTGGGCGAGG TGCGCGGCGG CGAGGCCCTC
GACATGCTCA ATGCCATGAA CACGGGCCAC GAAGGATCGC TGACCACCAT CCACGCCAAC
ACGCCGCGCG ATGCCCTGAC GCGCCTGGAG AACATGGTCA GCATGGCTGG CCTGACCATG
CCGGCCAAGG CCATGCGGCA GCAGATCGCC TCGGCGATTA CGGTGATCGT CCAGGCCGCG
CGCCTGACCG ATGGCCGGCG CAAGATTATC AGCATCTCGG AGATCACCGG CATGGAAGGC
GACATCATCA ACATGCAGGA GATCTTCACC TTCCAGCGCA CCGGCGTAGA CAAGGACGGC
ACCGTGCGCG GTCATTTCCG CGCCACGGGG GTGTACCCCA AGTTCGCCGA ACGCCTGCGC
GTGTTCGGCG TGGGCCTGCC CGACGAAATC TACGATCCGG CCAAGCGCCA TGAAGTCTGA
|
|---|
| Protein sequence | MSIREQLAGA GPAFTTNGHA AIQFTTGAPV STTASPGYHA LKREVHEVVL DRVELERLAR
FPQEQVRQEI STLVNLIIDE QRVLLNDNER RQLTVEIYDE MFGFGPLEPL LKDPTVSDIL
VNTGRQTYVE RRGKLELTDV VFYDDAHLMK VIEKIVSRVG RRIDETSPMV DARLPDGSRV
NAIIPPSAID GPLLSIRRFS VNPLQVSDLV ELRSLTPPMA QMLQALSKAK VNVLVSGGTG
SGKTTLLNIL SGFIPEDERV ITIEDAAELQ LRQPHVLRLE TRPPNIEGKG EITQRALVRN
ALRMRPDRII LGEVRGGEAL DMLNAMNTGH EGSLTTIHAN TPRDALTRLE NMVSMAGLTM
PAKAMRQQIA SAITVIVQAA RLTDGRRKII SISEITGMEG DIINMQEIFT FQRTGVDKDG
TVRGHFRATG VYPKFAERLR VFGVGLPDEI YDPAKRHEV
|
|---|
| |