| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2072 |
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| Symbol | |
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| ID | 3611739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | - |
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| Start bp | 2276799 |
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| End bp | 2279411 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637691463 |
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| Product | RNAse R |
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| Protein accession | YP_296280 |
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| Protein GI | 73541760 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.927626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCAAATA GTTTTCAGAA AAAATTGAAT CAAAACAACT ATCCGATCCC TAGCCGTGAA
GAAATCCTCG GCGTACTGAG AACATCGGGG TCGCCCCTGT CGGCCGGCGA TATCGCCAAG
GCCCTGTCCG TCACGCGCAA GGAGCATGAC GGATTCCAGA AGCGCCTGGC CGCGATGGAA
CGCGACGGGC AGGTCGAACT GAACCGCAAG GGCCGCTATG AACTGGCCCA TCAACCCAAT
TTCGTTACCG GCCGCGTGCA GGGGCACCGC GACGGTTTCG GCTTCCTGAT TCGCGACGAT
GGCGAGGACG ATATCTTCCT GCCCGAGCGC GAACTGCAAA AGGCCATGCA CAACGATCGC
GCGCAAGTGC GCGTGGTCGG CTACGACCGG CGCGGCCGCC CGGAAGGGCA AATCGTCGAG
ATCCTGGAAC GTGCCAACCG CTACGTGATC GGCCGCCTGC TCAGTGAAGG CGGCGTGCTG
GTGGTCGCGC CCGAGGACAA GCGCATCGGC CAGGACATCC TGATCCCGCC GAAGGCGCAG
GGCAAGGCGC GCGTTGGCCA GGTGGTCAGC GTCGAACTGA TCGAGTTCCC GGACCGCTAC
GTCCAGCCGG TCGGGCGCGT GGTGGAGGTG CTCGGCGATA TCGACGATCC GGGCATGGAA
ATCGAGATTG CGGTGCGCAA GTACGGCGTG CCGCATGCGT TCTCGCAAGC CGCGGCCAAG
GAAGCCTCGG CGCTGCCCGA TGAGGTGCGC CAGACCGACC TGGACCACCG CATTGACCTG
CGCGATGTGC CGCTTGTCAC GATCGACGGC GAAGACGCGC GCGACTTCGA CGACGCGGTT
TACTGCGAGC CGGTGAAGAT GGGCCGCAGC AAGGGCTGGC GCCTGATCGT GGCCATTGCC
GATGTTTCGC ACTACGTGCG GCCTGGCACG CCGCTCGATG CCGACGCGCT CGATCGCGCC
ACCTCCGTGT ACTTCCCGCG CCGGGTGATC CCCATGCTGC CGGAGAAGTT GTCGAATGGC
CTGTGCTCGC TCAACCCGCA GGTGGACCGC CTGTGCATGG TGTGCGACGC GGTGATTACG
GCCAAGGGCG AGCTGAAGGG GTACCAGTTC TATCCGGCGG TCATGCACTC GGCGGCGCGG
CTGACCTATA ACGAGGTCTG GTCGGTCCTG TCGAACACGA AGGGGCCGGA GGCCCACAAG
CGCGCCGAGC TGGTGCCGCA CCTGCAGAAC CTGTACGAGC TGTTCCAGGT CCTGCTCAAG
GCGCGGCGCG AGCGTGGCGC GATCGATTTC GATACCACCG AGACCTACAT CGTCTGCAAT
GCCCAGGGCA AGATCGAGCA GATCCTGCCG CGCACGCGAA ATGACGCCCA CCGGCTGATC
GAGGAGTGCA TGCTGACGGC CAACGTCTGC GCGGCCGATT TCCTCGAGCG CTTCAAGCAC
CCGGCGCTGT ACCGCATCCA CGCAGGCCCG AGCGAGGAAA AGCTCAAGAA CCTGCGCGAG
TTCCTGAAGA CCTCGGGCCT GTCGCTCGGC GGCGGCGACA AGCCGCAGGC GTCCGACTAC
GCCGAGGTGA TGGACAAGAT CAAGTCGCGG CCCGATGCGC CGATGCTGCA GACCATGCTG
CTGCGCTCGA TGCAGCAGGC CGTGTACAGC CCGGACAATA TCGGCCACTT CGGCCTGGCG
TACGAAGCCT ACGCGCATTT CACCAGCCCG ATCCGCCGCT ATCCGGACCT GCTGGTGCAC
CGCGCGATCA AGGCCGTCCT TGCGCACACC AAGTATCAGC CGGCCTTCGC TCACGGTACC
GAACTCAACA CCGCGATCTC GCCGAAGGCG CGGCGCCTGC AAGCCAAGGA CGCCGAGCAG
AAGGCGGAAC TGACGGCGGC GCGTGCACGG CGCAACGAGG CGATCTGGGA CGAACTGGGG
CTGCACTGCT CGGCCAACGA GCGGCGTGCC GATGAGGCAT CGCGCGATGT CGAGGCCTGG
CTCAAGTGCT ACTTCATGCG CGACAAGCTC GGCAGCGATT TCGCCGGTAC CGTCAGCGCC
GTGACGTCGT TCGGCATCTT CGTGCAGCTC GACGAGCTGT ACGTGGAAGG GCTGGTGCAC
GTCACCGAAC TCGGCAGCGA TTACTTCCAG TACGACGAAG CGCGCAACGA ACTGCGCGGC
GAACGCACGG GTATCCGGTA CCGACTGACG GATCGCGTGC GCGTGCAGGT GTCGCGTGTG
GATCTCGACG CGCGCAAGAT CGACTTCCGC CTGGTGCAGG AGCCATCGGC CAAGACGCTG
CGGGCCCGTG CCGGCGTGGG CGAACCGCCG CGTGTGCCGG CCGCCCATGC GGTGCCGGCG
CGCAAGAAGG GCCGGCAACT GGCGGCTTTG CTCGGCGGTA CTTCCAAGCC GGAGGAGTCG
TTCGATGAAA CGCTGGACCG CGTGATCGAA GAGCAACCGG TGTTCGAAGC CGTGATCACG
CCGCTGCGTC CGCACGTCAA GACCGGCGGC AAGCCGGCCA AGCGTGCCGC CAAGCCCAAG
CCAGCCCATC TGGACAAGTC GCGCAAGCCG GCCTCGAAGA CGCACCCGGC CAAGACCGCA
GGCAAAACCT CGCGCACGCC GCGCAAGCGT TGA
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| Protein sequence | MSNSFQKKLN QNNYPIPSRE EILGVLRTSG SPLSAGDIAK ALSVTRKEHD GFQKRLAAME
RDGQVELNRK GRYELAHQPN FVTGRVQGHR DGFGFLIRDD GEDDIFLPER ELQKAMHNDR
AQVRVVGYDR RGRPEGQIVE ILERANRYVI GRLLSEGGVL VVAPEDKRIG QDILIPPKAQ
GKARVGQVVS VELIEFPDRY VQPVGRVVEV LGDIDDPGME IEIAVRKYGV PHAFSQAAAK
EASALPDEVR QTDLDHRIDL RDVPLVTIDG EDARDFDDAV YCEPVKMGRS KGWRLIVAIA
DVSHYVRPGT PLDADALDRA TSVYFPRRVI PMLPEKLSNG LCSLNPQVDR LCMVCDAVIT
AKGELKGYQF YPAVMHSAAR LTYNEVWSVL SNTKGPEAHK RAELVPHLQN LYELFQVLLK
ARRERGAIDF DTTETYIVCN AQGKIEQILP RTRNDAHRLI EECMLTANVC AADFLERFKH
PALYRIHAGP SEEKLKNLRE FLKTSGLSLG GGDKPQASDY AEVMDKIKSR PDAPMLQTML
LRSMQQAVYS PDNIGHFGLA YEAYAHFTSP IRRYPDLLVH RAIKAVLAHT KYQPAFAHGT
ELNTAISPKA RRLQAKDAEQ KAELTAARAR RNEAIWDELG LHCSANERRA DEASRDVEAW
LKCYFMRDKL GSDFAGTVSA VTSFGIFVQL DELYVEGLVH VTELGSDYFQ YDEARNELRG
ERTGIRYRLT DRVRVQVSRV DLDARKIDFR LVQEPSAKTL RARAGVGEPP RVPAAHAVPA
RKKGRQLAAL LGGTSKPEES FDETLDRVIE EQPVFEAVIT PLRPHVKTGG KPAKRAAKPK
PAHLDKSRKP ASKTHPAKTA GKTSRTPRKR
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