Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_A1790 |
Symbol | |
ID | 3610143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007347 |
Strand | - |
Start bp | 1954053 |
End bp | 1954670 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637691180 |
Product | RNA polymerase sigma factor |
Protein accession | YP_295999 |
Protein GI | 73541479 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.908716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAGCAA CCGACAAGTC CAGCCGCTTC GCGCAAGTGG CGCTGCCGCA TCTGGATGCC GCCTACAACC TGGCGCGCTG GCTAAGCGGC AGCGCAAGCG ATGCAGACGA TATCGTGCAG GATGCCTATC TGCGCGCATA CCGATTCTTC GACAGCTTCA ACGGCGATGG CGCGCGCGCA TGGCTGCTGG CCATCGTCAG GAACACGTGG TTCAGCGAAT GGCGCCGGCG GCGTGATGCG GCGGACGGGA CGCCTTACGA CGATACGTTG CATGGCGATG AGCGATTGCC CGGTTGGGTC GACGATATCG GCACCAATCC GGAAATGCTT GCGGTGCGCC ACGACGAAGT GCAGCTGGTC CACCGGGCGC TCGAACGCTT GCCAGTCGTG TACCGAGAAG TGCTTGTCCT GCGGGAACTC GAAGACATGA GCTATCGCGA TATCGCTCTG GTTGCCGATA TCCCGATCGG AACCGTGATG TCGCGGCTGG CGCGCGCGCG TCACATGCTC TGTGCCGCGG TGCGCGCCGA GCAGGCCAGG GCGCATAGCC ATGTCGGCGG CAGCGCGCGT CTTCAGGTGC CGGTGCAGGA CCATTCGATG GGAGCGAATC ATGGATGA
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Protein sequence | MIATDKSSRF AQVALPHLDA AYNLARWLSG SASDADDIVQ DAYLRAYRFF DSFNGDGARA WLLAIVRNTW FSEWRRRRDA ADGTPYDDTL HGDERLPGWV DDIGTNPEML AVRHDEVQLV HRALERLPVV YREVLVLREL EDMSYRDIAL VADIPIGTVM SRLARARHML CAAVRAEQAR AHSHVGGSAR LQVPVQDHSM GANHG
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