Gene Reut_A1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A1790 
Symbol 
ID3610143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp1954053 
End bp1954670 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content64% 
IMG OID637691180 
ProductRNA polymerase sigma factor 
Protein accessionYP_295999 
Protein GI73541479 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.908716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAGCAA CCGACAAGTC CAGCCGCTTC GCGCAAGTGG CGCTGCCGCA TCTGGATGCC 
GCCTACAACC TGGCGCGCTG GCTAAGCGGC AGCGCAAGCG ATGCAGACGA TATCGTGCAG
GATGCCTATC TGCGCGCATA CCGATTCTTC GACAGCTTCA ACGGCGATGG CGCGCGCGCA
TGGCTGCTGG CCATCGTCAG GAACACGTGG TTCAGCGAAT GGCGCCGGCG GCGTGATGCG
GCGGACGGGA CGCCTTACGA CGATACGTTG CATGGCGATG AGCGATTGCC CGGTTGGGTC
GACGATATCG GCACCAATCC GGAAATGCTT GCGGTGCGCC ACGACGAAGT GCAGCTGGTC
CACCGGGCGC TCGAACGCTT GCCAGTCGTG TACCGAGAAG TGCTTGTCCT GCGGGAACTC
GAAGACATGA GCTATCGCGA TATCGCTCTG GTTGCCGATA TCCCGATCGG AACCGTGATG
TCGCGGCTGG CGCGCGCGCG TCACATGCTC TGTGCCGCGG TGCGCGCCGA GCAGGCCAGG
GCGCATAGCC ATGTCGGCGG CAGCGCGCGT CTTCAGGTGC CGGTGCAGGA CCATTCGATG
GGAGCGAATC ATGGATGA
 
Protein sequence
MIATDKSSRF AQVALPHLDA AYNLARWLSG SASDADDIVQ DAYLRAYRFF DSFNGDGARA 
WLLAIVRNTW FSEWRRRRDA ADGTPYDDTL HGDERLPGWV DDIGTNPEML AVRHDEVQLV
HRALERLPVV YREVLVLREL EDMSYRDIAL VADIPIGTVM SRLARARHML CAAVRAEQAR
AHSHVGGSAR LQVPVQDHSM GANHG