Gene Reut_A1726 details

Gene Information

• Locus tag: Reut_A1726
• ID: 3609458
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia eutropha JMP134
• Kingdom: Bacteria
• Replicon accession: NC_007347
• Strand: -
• Start bp: 1862870
• End bp: 1864798
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637691113
• Product: Rhs element Vgr protein
• Protein accession: YP_295935
• Protein GI: 73541415
• COG category: [S] Function unknown
• COG ID: [COG3501] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR01646] Rhs element Vgr protein; [TIGR03361] type VI secretion system Vgr family protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCCGG CCACCGCCAC CCAGTCCGAC AGCTTCGCCA CGGTCACCAC GCCGTTTGGC 
GACGATGTGC TGCTGCTCGA CGGATTTGCC GGGCGCGAGG CGCTTTCCGA GCTGTTTTCC 
TTCCAGCTGC GCATGCGCTC GGCGGACAAG GCGCTCGATG CCAGCCGCAT CGTTGGCCAG 
AAGGTCACGG TCAGGCTCCA GCGGCCGGGC GGCTTCCTGC GTTGTTTCAA CGGCATCGTG 
ACGCGCTTCG CCCATACCGG CGCCGACCCC AGCCACGCGT TCTACAGCGC CGAGCTGGCG 
CCGCGCCTGT GGCTGCTGAC GCTGGCGCGC GACCGCAGGA TCTTCCAGAA CCAGAGCGCG 
CTCGACATCA TCCGCACCGT GCTGGGCGAG TTCGAGGTGG CATTCGACGC GCGCGTCACC 
GCTTCGCGCT ACCCGGTGCG CGAGTACTGC GTGCAGTACG ACGAAAGCCC CCTGCAGTTC 
ATCTCGCGGC TGATGGAGGA AGAGGGCATC TTCTACTACT TCACCTTTTC CGACGGCGCG 
CACACCATGG TGCTGGGTGA CAGTCCCTCG GCCCACGCCG CGCTGGCCCA CGAGGCCGAG 
CTGTGGGGCG GCCAGCCGGG CGAGCAGGCG GCGGGCCTGC CGATGCTGGC GGCCTTCCGC 
ATGGAACAGG GACTCGGTCC GGCCAACCAC GTGCTGGTCG ACTATGACTA TGTGCAGGCG 
CAGACCAGCC AGGGCAGTGC GCAGCCGGAC TCGAGCGCGC CCGGCGCGCG CCAGTACATT 
TTCCCGGGGC GCCACAAGGA TGCCTCGGAT GCCGCGCGCA AGGCGGCGGT GCGAGTGGCC 
GCACAGCAGG TCGAGGCTCG CTCCGGCAGC GGCGAGAGCA ACTGTCACGG CCTTGCCGCA 
GGGAGTACCT TCACCCTCAA CGGCCACGTC AATGCGGCAC TGAACGCCGA GTACGTGGTG 
CGCGCGGTCG AGCACTCGGT GGCCGGCAGC CACTATGCCA ACAGCTTCAC GGTGTTTCCG 
CTGGCGGTGC CATTCCGCGC GCCGCTGGTA ACGCCGCGTC CGCTGGTGGC CGGCACCCAT 
ACCGCAACCG TGGTCGGCTC CCAGGGCGAG GAAATCTGGA CGGACCAGCA CGGCCGTATC 
AAGCTCAAGT TCCACTGGGA CCAGGCGCCC GGCGCCGACC AGGACAGCTC GTGCTGGGTC 
CGGGTGGCGC AGGGCATGGC TGGCCAGGGC TGGGGCCATC TGTTCCTGCC ACGCGTGGGG 
CAGGAGGTGG TAGTCAGCTA TGTCGACGGC GATCCCGACC GGCCGCTGGT GACCGGCAGC 
GTCTACAACG GCCAGGTGAC GCCGCCGGTG ACGCTTCCCT CGATGCAGAC CCAGAGCGTG 
ATCCGCTCGC GCACTTCCAA GAACGGCAGC GCCGGCAACG AGCTGCGCAT GGAGGACAAG 
GCCGGCGCCG AAGAGCTCTA CCTGCACGCG CAGCGCGACA TGAACGTGGC GGTGGAAAAC 
AAGCTGTCCA CCACCGTGGT CGGCGCTGGC GAGTCGCATG TTGTCCAGAA GGGTGACCGG 
CTGGTCGAGG TGCAGTCGGG CAACGAAACT CACAAGGTGA GCGGCACCCG TAGCCTCGAG 
GTGACCGGTG ACGAGACCCG CACCAACGGC GCCGCCTTCA CCCAGGAGGT CAGCGGGGCC 
TACAAGCTCA AGGTGTCTGG CGATCTGGTC ATCGACGTGA CGGGCGCCAT CACCATCAAG 
TCGGCAGGCT CGGTGGCGAT TGAGGCTGGC ACTTCGCTGA GCAACAAGGC GGGCACCACG 
CTGGCAAACA AGGCAGGCAC TACGCTGAGT GGCGAGGGCC TGACCGTGCA GCAGAAGGCG 
TCGGCCTCGC ACACGGTGGA AAGCGGCGGC ATGCTGGAGC TCAAGGGCGC CATGGTGAAA 
CTGAACTGA 

 

Protein sequence

MIPATATQSD SFATVTTPFG DDVLLLDGFA GREALSELFS FQLRMRSADK ALDASRIVGQ 
KVTVRLQRPG GFLRCFNGIV TRFAHTGADP SHAFYSAELA PRLWLLTLAR DRRIFQNQSA 
LDIIRTVLGE FEVAFDARVT ASRYPVREYC VQYDESPLQF ISRLMEEEGI FYYFTFSDGA 
HTMVLGDSPS AHAALAHEAE LWGGQPGEQA AGLPMLAAFR MEQGLGPANH VLVDYDYVQA 
QTSQGSAQPD SSAPGARQYI FPGRHKDASD AARKAAVRVA AQQVEARSGS GESNCHGLAA 
GSTFTLNGHV NAALNAEYVV RAVEHSVAGS HYANSFTVFP LAVPFRAPLV TPRPLVAGTH 
TATVVGSQGE EIWTDQHGRI KLKFHWDQAP GADQDSSCWV RVAQGMAGQG WGHLFLPRVG 
QEVVVSYVDG DPDRPLVTGS VYNGQVTPPV TLPSMQTQSV IRSRTSKNGS AGNELRMEDK 
AGAEELYLHA QRDMNVAVEN KLSTTVVGAG ESHVVQKGDR LVEVQSGNET HKVSGTRSLE 
VTGDETRTNG AAFTQEVSGA YKLKVSGDLV IDVTGAITIK SAGSVAIEAG TSLSNKAGTT 
LANKAGTTLS GEGLTVQQKA SASHTVESGG MLELKGAMVK LN