Gene Reut_A1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A1600 
Symbol 
ID3609658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp1722977 
End bp1723723 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content63% 
IMG OID637690988 
ProductNAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR 
Protein accessionYP_295810 
Protein GI73541290 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.766796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCATC CTGTTGTCCT GATCACCGGT GCAACCGCAG GCATCGGCCG CGCGACGGCG 
CTTGCCTTCG CAGCCAAAGG CGCGCGGCTG GTCTGCTCCG GGCGAAACGC CACGGCCGGA
GACGCGCTCG TTTCGGAACT CCGGCAAATG GGCGCCGAAG CAGACTTCCT CGCGGCCGAC
ATCAGCCTTG AGGGCGATGT CATCCGTCTT GTCAGGCATG CCATCGAACG CTTTGGATCG
CTCGATATCG CCGTGAACAG TGCCGGGACG GAAGGAACAC CGGGGTCGAT CGTCGAGCAG
ACCGTCGAGT CGTACACGAC GACGTTCAAT GCGAATGTCC TTGGCACGTT CCTCTGCATG
AAGCACGAGC TGCAAGCAAT GATCTCGCAA AAGCGTGGGT CGATTGTCAA TCTCTCGTCC
ACGATGGGCA GCCGCGGCAA TCCGCGCAAT CCGATGTACG TGGCCAGCAA GCACGCGGTC
GAGGGCCTGA CCAAGTCGGC GGCGCTCGAT GCCATCCAAT CGAATGTCCG CGTCAATGCC
GTGGCGCCCG GCCCGATTGA AACCGGCATG CTCGAGCGCA TTGCGGGCGG CACCGATCGG
GTAGCGTCGG TCGCGGCAAC GATTCCCGCA GGACGCGTCG GCACGCCGGA GGAAGTGGCC
GATGCAATCC TCTTCCTGGC CTCCGAGCAA GCGACGTACA TCACGGGCCA GATCCTTCAC
GTCAACGGCG GGAAGACTGC CGCGTAA
 
Protein sequence
MSHPVVLITG ATAGIGRATA LAFAAKGARL VCSGRNATAG DALVSELRQM GAEADFLAAD 
ISLEGDVIRL VRHAIERFGS LDIAVNSAGT EGTPGSIVEQ TVESYTTTFN ANVLGTFLCM
KHELQAMISQ KRGSIVNLSS TMGSRGNPRN PMYVASKHAV EGLTKSAALD AIQSNVRVNA
VAPGPIETGM LERIAGGTDR VASVAATIPA GRVGTPEEVA DAILFLASEQ ATYITGQILH
VNGGKTAA