| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1529 |
|---|
| Symbol | |
|---|
| ID | 3611472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 1646525 |
|---|
| End bp | 1647676 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637690917 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_295739 |
|---|
| Protein GI | 73541219 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.824388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCTG CCCCCGACGC CGCCGCCCTG CCGGCCAGCG AGCTGAGCGC CCTGCTCGGC
CAGCTCTACC AGGGCCCCAC CGAAACGGTA CCGTGGGCCG GCTTTCTGGA AAGCGTGCGA
GAGCGGCTCG ACGCGTCCTT CGTCACGCTG GTGCTGCGCC ACCCCGCCAC CGACCGGCCC
GGGCTGATCG TCAACGCATC GCCATTCGGA CCGCACCTGC CGGGCGAGCC TTCCTACAGC
GAACAGTATT ACGCGCTATG TCCATTCCTG AACCTGCACC CCGACCAGAT CTTCAGCGCC
GATGAGCTGT TCGGCGAAGC GGGATGGATC GCGCATCCCT TCTATCTGCA ATATCTGCAG
CCGCTTGACC TGCGCTACAT CCTGGCGGCC AACCTGCGTA CACCGGACGG CGTGGAATGT
GCGCTGTTCA TCAGCCGCGG CCATCATGGG GAAGACTTCA GCCCTGCCGG CAAGACGCTG
CTGGCGCAGT TGCTGCCCCA CCTGAAGCGC GCCGTGGACC TGCACGCGGC GCTGGACGTA
CTCGAATCCG AACGCGCCCT CTACGCCGAT GCGGTCGACC GCCTGCTGGT CGGCACCGTG
ATCCTGGACG AAGACGGCAA GGTCATGAAG GCCAATGACG TTGCCGGGCG GTTGCTGCAG
GCACGCGACG GCCTTTGTCT TTGCAACGGT GCGCTACAGG CAAACAATCC GGTGGAGAAC
CGCACGTTCC GCAAGATCGT GGACGCGGCG ATCGAAGCCC ATGGACTGGC GGCATCGCGC
AGTGAAGTCA CTACGCTGAC GCGACCCGCG GTGGCGACGC CGCTGAGCGT GCTGGTGCGG
CCCATTCCCC TCAGCTACCG TGCCGAAGAC AAGGCGCGGC GGCCTGCCGT GGCGGTCTTC
ATCCGCGATC CGGCGGGATC CCCGCGTAAT GCGCATGCAA GCTTGCGCAA GCTGTTCCGG
CTGACGCCTA CGGAGATCGA ACTCGCGCTG CTGATGATGG ACGGGCTGAC GCTGGACGAA
GCCGCCGGCC GGTTGGGGAT CAAGAAAAAT ACGGCCCGGG CGCATCTGCG CGGGATTTTT
GCCAAGACGG GGGCGACGAG ACAGGCAGTG CTGGTGAAGA CGTTGCTGTC GAGTGTGGTG
GCGATGGGGT GA
|
|---|
| Protein sequence | MLPAPDAAAL PASELSALLG QLYQGPTETV PWAGFLESVR ERLDASFVTL VLRHPATDRP
GLIVNASPFG PHLPGEPSYS EQYYALCPFL NLHPDQIFSA DELFGEAGWI AHPFYLQYLQ
PLDLRYILAA NLRTPDGVEC ALFISRGHHG EDFSPAGKTL LAQLLPHLKR AVDLHAALDV
LESERALYAD AVDRLLVGTV ILDEDGKVMK ANDVAGRLLQ ARDGLCLCNG ALQANNPVEN
RTFRKIVDAA IEAHGLAASR SEVTTLTRPA VATPLSVLVR PIPLSYRAED KARRPAVAVF
IRDPAGSPRN AHASLRKLFR LTPTEIELAL LMMDGLTLDE AAGRLGIKKN TARAHLRGIF
AKTGATRQAV LVKTLLSSVV AMG
|
|---|
| |