Gene Reut_A0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A0946 
Symbol 
ID3609743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp1032726 
End bp1033292 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content62% 
IMG OID637690337 
ProductRNA polymerase factor sigma-70 
Protein accessionYP_295169 
Protein GI73540649 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACCG ACCAGGAACT GTCCGATTTT CTCGCCAGCG TCGAGCGGCG CGCCTTCAAG 
CAGGCGGTAT TTGCCGTGCG CGACGACGAA GCTGCGCTGG ACATTGTCCA GGACGCCATG
ATCAAGCTCG CGGAAAAATA CGGCGACAAG AGCGCCGCCG AGCTGCCTCC GCTGTTCCAG
CGCATCCTCC AGAACACCAT TCACGACTGG TTCCGCCGCC AGAAAGTCCG CAATACCTGG
ATATCACTGT TTTCCTCGCT GCGCGACGAG CGCGACGGCG ACGATAACGA CCTGCTCGAT
ACACTCGAGG CCGAAGCCGG CACGGAAATG GCCGAAAGCA GTGCCGACAA GGTCGAGCGG
GCGCAGGTCA TGGCGATCAT CGAACAGGAA ATCCAGCGAC TGCCCACGCG TCAACGGGAG
GCATTCCTGA TGCGTTACTG GGAGGATATG GACGTCGCCG AAACCGCCGC GGTCATGGGG
TGCTCAGAAG GCAGCGTCAA GACGCACTGT TCCCGTGCCA CGCATACCCT GGCGCAAGCA
TTGCGCGCAC GGGGGGTCCG ACTATGA
 
Protein sequence
MATDQELSDF LASVERRAFK QAVFAVRDDE AALDIVQDAM IKLAEKYGDK SAAELPPLFQ 
RILQNTIHDW FRRQKVRNTW ISLFSSLRDE RDGDDNDLLD TLEAEAGTEM AESSADKVER
AQVMAIIEQE IQRLPTRQRE AFLMRYWEDM DVAETAAVMG CSEGSVKTHC SRATHTLAQA
LRARGVRL