Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_A0533 |
Symbol | |
ID | 3611253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007347 |
Strand | + |
Start bp | 579668 |
End bp | 580153 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637689924 |
Product | general secretion pathway protein H |
Protein accession | YP_294759 |
Protein GI | 73540239 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.179216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGGG TACAACAAAT CAAGAAGCTG GGCCGTCGGG TTCAGAAGGG TTTTACGCTG ATCGAACTGA TGATCGTGGT TGCGATCATT GGTATTTTGG CGGCTATTGC TATTCCGCAA TATCAGGACT ACGTGACGCG CGCACGTTGG TCGGACAACA TCACGTCTAT TGCTCCCTTG AAGCAGGCGA TTGCGGAATG CGTACAAAAC AACGCTCAGG CAGCAATTGC TGCGCCTTGC GACGACGCTA CCGCAGCAAC GGGCTTGGTA AGCACCGCTG GTGGTGGCTA CACGGCGGGC GTTCCTACGC CGTCGAGCGC TACTGTGACC TATACCGGTG GTGTGATCAC CCTTACGGGT ACCGCCGCTG CAGGGAACTG CGTTGTGACC GTCACGCCGG TGCCCTCGGC AACAGCTGTT ACTTGGACTG TTGCGAACCA AGCCGGCGGC GCAGTAGTTT GCACTAAGTC CAAGACTGGT GTCTAA
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Protein sequence | MQRVQQIKKL GRRVQKGFTL IELMIVVAII GILAAIAIPQ YQDYVTRARW SDNITSIAPL KQAIAECVQN NAQAAIAAPC DDATAATGLV STAGGGYTAG VPTPSSATVT YTGGVITLTG TAAAGNCVVT VTPVPSATAV TWTVANQAGG AVVCTKSKTG V
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