Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_A0355 |
Symbol | |
ID | 3609501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007347 |
Strand | - |
Start bp | 384623 |
End bp | 386104 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637689745 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_294581 |
Protein GI | 73540061 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCGT CGCTCCAGCT CCGCCTTTCG CAGCATCTGG CACTCACGCC GCAACTGCAG CAGTCGATCC GACTGCTGCA ACTCTCAACG CTGGAACTGC AACAGGAAGT CGAGCAGGCG CTCACGGAGA ACCCGCTGCT GGAGCGCGAA AACGACTGGA TCGAAAGTCC GCTGCGCGTA GCGGCAGATG GCTCGGTCAA CCTGCAAAGT GCCCCGGCTC CCGCTCCTGC CGAACCGCAG GGCAATGGCG AAGCGAATGC CGACAGCGCA CGCGGCAGCG ATGACGAGAA CTACACCGAC AGCGGCGGTG ACGACTACGG CAGCGACTGG AGCCTCGACG ATTTCGCGCG GCGCCCCCAG GGCGAGGACG ACGAAAAGAC GCCCATGCAG CTGCGCGATG CCGAGCCCAC GCTGCGCGAA CATCTGATGG AACAGCTCAC GCCGCTGAAG ATTTCGCTGC GCGACAAGGG GCTGGCGATC TTCCTGATCG AATCGCTCGA TGACGACGGC TACCTGAGCA CGTCGCTCGA CGAGATCTGC TCGGAACTGC CCGAGGAACT CGAATTCGAA GTCGACGAAG TCCAGGCCAT GCTCACGCTG CTGCAGAGCT TCGACCCGGC GGGCGTGGGC GCGCGCAATG CAGCCGAATG CCTGAGCCTG CAATTGCGCC GGCTGCAGCA CCCGCAGCGC GAACTGGCGC TGTCGATCGT CCAGCATCAT CTTGAATTGC TTGCGGTGCG CGACTACACG CGCCTGAAAA AAGCGCTGCA GGTGGACGAA GCGGCGCTAA AAGCCGCGCA TGAACTGATC CGTTCGCTCG CGCCGTATCC CGGGCATGCG TATAGCCGGC CTGAAGCGGA TTTCGTAGTG CCCGACGTGT TCGTGCGCAA GAGCGGCAGC AGCTGGATTG CACAGCTGAA CCCGGATGTG ATGCCCCGCC TGCGCATCAA CGACATGTAC GCGCAGATCC TGCGCGGAGC GAAGGGGGAA TCCGGCGCTG CCGGGCTGCA GCAAAAGCTG CAGGAGGCAC GTTGGCTGAT CAAAAATATT CAGCAAAGGT TCGACACAAT CCTGCGAGTT TCACAGGCAA TTGTCGAACG TCAGAAGAAC TTTTTCACGC ACGGCGAAAT CGCGATGCGC CCCTTGGTTT TGCGGGAGAT TGCCGATACA CTGGGATTAC ACGAGTCAAC CATATCCCGG GTGACGACCA ATAAATACAT GGCAACGCCG ATGGGTACTT TCGAACTGAA GTACTTCTTC GGTAGCCACG TGTCCACCGA AACCGGTGGC GCGGCTTCAT CAACGGCGAT CCGCGCCTTG ATCAAGCAAC TTATAGGAGC CGAAGACCCG AGGAGTCCTC TTTCCGACAG CCGAATTGCC GAATTGCTGG GTGAACAAGG CTTCGTTGTC GCGCGCCGTA CCGTCGCCAA GTATCGCGAA GCCCTGAAGA TCCCCGCTGT CAATCTCCGC AAGACTTTGT AG
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Protein sequence | MKPSLQLRLS QHLALTPQLQ QSIRLLQLST LELQQEVEQA LTENPLLERE NDWIESPLRV AADGSVNLQS APAPAPAEPQ GNGEANADSA RGSDDENYTD SGGDDYGSDW SLDDFARRPQ GEDDEKTPMQ LRDAEPTLRE HLMEQLTPLK ISLRDKGLAI FLIESLDDDG YLSTSLDEIC SELPEELEFE VDEVQAMLTL LQSFDPAGVG ARNAAECLSL QLRRLQHPQR ELALSIVQHH LELLAVRDYT RLKKALQVDE AALKAAHELI RSLAPYPGHA YSRPEADFVV PDVFVRKSGS SWIAQLNPDV MPRLRINDMY AQILRGAKGE SGAAGLQQKL QEARWLIKNI QQRFDTILRV SQAIVERQKN FFTHGEIAMR PLVLREIADT LGLHESTISR VTTNKYMATP MGTFELKYFF GSHVSTETGG AASSTAIRAL IKQLIGAEDP RSPLSDSRIA ELLGEQGFVV ARRTVAKYRE ALKIPAVNLR KTL
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