Gene Reut_A0355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A0355 
Symbol 
ID3609501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp384623 
End bp386104 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content61% 
IMG OID637689745 
ProductRNA polymerase factor sigma-54 
Protein accessionYP_294581 
Protein GI73540061 
COG category[K] Transcription 
COG ID[COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 
TIGRFAM ID[TIGR02395] RNA polymerase sigma-54 factor 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGT CGCTCCAGCT CCGCCTTTCG CAGCATCTGG CACTCACGCC GCAACTGCAG 
CAGTCGATCC GACTGCTGCA ACTCTCAACG CTGGAACTGC AACAGGAAGT CGAGCAGGCG
CTCACGGAGA ACCCGCTGCT GGAGCGCGAA AACGACTGGA TCGAAAGTCC GCTGCGCGTA
GCGGCAGATG GCTCGGTCAA CCTGCAAAGT GCCCCGGCTC CCGCTCCTGC CGAACCGCAG
GGCAATGGCG AAGCGAATGC CGACAGCGCA CGCGGCAGCG ATGACGAGAA CTACACCGAC
AGCGGCGGTG ACGACTACGG CAGCGACTGG AGCCTCGACG ATTTCGCGCG GCGCCCCCAG
GGCGAGGACG ACGAAAAGAC GCCCATGCAG CTGCGCGATG CCGAGCCCAC GCTGCGCGAA
CATCTGATGG AACAGCTCAC GCCGCTGAAG ATTTCGCTGC GCGACAAGGG GCTGGCGATC
TTCCTGATCG AATCGCTCGA TGACGACGGC TACCTGAGCA CGTCGCTCGA CGAGATCTGC
TCGGAACTGC CCGAGGAACT CGAATTCGAA GTCGACGAAG TCCAGGCCAT GCTCACGCTG
CTGCAGAGCT TCGACCCGGC GGGCGTGGGC GCGCGCAATG CAGCCGAATG CCTGAGCCTG
CAATTGCGCC GGCTGCAGCA CCCGCAGCGC GAACTGGCGC TGTCGATCGT CCAGCATCAT
CTTGAATTGC TTGCGGTGCG CGACTACACG CGCCTGAAAA AAGCGCTGCA GGTGGACGAA
GCGGCGCTAA AAGCCGCGCA TGAACTGATC CGTTCGCTCG CGCCGTATCC CGGGCATGCG
TATAGCCGGC CTGAAGCGGA TTTCGTAGTG CCCGACGTGT TCGTGCGCAA GAGCGGCAGC
AGCTGGATTG CACAGCTGAA CCCGGATGTG ATGCCCCGCC TGCGCATCAA CGACATGTAC
GCGCAGATCC TGCGCGGAGC GAAGGGGGAA TCCGGCGCTG CCGGGCTGCA GCAAAAGCTG
CAGGAGGCAC GTTGGCTGAT CAAAAATATT CAGCAAAGGT TCGACACAAT CCTGCGAGTT
TCACAGGCAA TTGTCGAACG TCAGAAGAAC TTTTTCACGC ACGGCGAAAT CGCGATGCGC
CCCTTGGTTT TGCGGGAGAT TGCCGATACA CTGGGATTAC ACGAGTCAAC CATATCCCGG
GTGACGACCA ATAAATACAT GGCAACGCCG ATGGGTACTT TCGAACTGAA GTACTTCTTC
GGTAGCCACG TGTCCACCGA AACCGGTGGC GCGGCTTCAT CAACGGCGAT CCGCGCCTTG
ATCAAGCAAC TTATAGGAGC CGAAGACCCG AGGAGTCCTC TTTCCGACAG CCGAATTGCC
GAATTGCTGG GTGAACAAGG CTTCGTTGTC GCGCGCCGTA CCGTCGCCAA GTATCGCGAA
GCCCTGAAGA TCCCCGCTGT CAATCTCCGC AAGACTTTGT AG
 
Protein sequence
MKPSLQLRLS QHLALTPQLQ QSIRLLQLST LELQQEVEQA LTENPLLERE NDWIESPLRV 
AADGSVNLQS APAPAPAEPQ GNGEANADSA RGSDDENYTD SGGDDYGSDW SLDDFARRPQ
GEDDEKTPMQ LRDAEPTLRE HLMEQLTPLK ISLRDKGLAI FLIESLDDDG YLSTSLDEIC
SELPEELEFE VDEVQAMLTL LQSFDPAGVG ARNAAECLSL QLRRLQHPQR ELALSIVQHH
LELLAVRDYT RLKKALQVDE AALKAAHELI RSLAPYPGHA YSRPEADFVV PDVFVRKSGS
SWIAQLNPDV MPRLRINDMY AQILRGAKGE SGAAGLQQKL QEARWLIKNI QQRFDTILRV
SQAIVERQKN FFTHGEIAMR PLVLREIADT LGLHESTISR VTTNKYMATP MGTFELKYFF
GSHVSTETGG AASSTAIRAL IKQLIGAEDP RSPLSDSRIA ELLGEQGFVV ARRTVAKYRE
ALKIPAVNLR KTL