| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4409 |
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| Symbol | |
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| ID | 5541922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5660362 |
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| End bp | 5662068 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640896507 |
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| Product | ABC transporter related |
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| Protein accession | YP_001434443 |
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| Protein GI | 156744314 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR01166] cobalt transport protein ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.466878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0210144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATA TGGGGCAACA ACACACCCCT ATTGCGCTGC ACCGTGTGAC CTTCACCTAC
GCGGGAGCAA CCGAACCGGC GTTGCGCAAC GTAACGCTTA CGGTTCCTGC CGGTCAGATC
TGCGCAGTTA TCGGCAGGGC CGGCGCCGGC AAAAGCACCC TCTGCGCGCT CTGCGCCGGC
TTCGTGCCGC ACTTCTTTCG CGGTCGTCTC GACGGTGATG CGTCGGTTGA TGGATTGGCG
ATAGCCACCC ATCCCATCGC CGAACTGGTG CGTCATGTGG CGCTGGTCGG CAGCAACGCC
TTCAGCCAGA TCTCCGGCGC GCGGTTCACC GTGTACGACG AAGTGGCATT TGGGCTGGAA
AATCTCGGCG TGCCGCGAGA AGAGATGATC GCGCGCGTCG AATGGGCGCT TCAGGCGCTT
GGCATCGACC ATCTGCGTGA CCGTTCGCCT TATGCGCTGT CGGGTGGGCA GCAGCAGCGC
ATGGTCATTG CCGCTGCGCT GGCGATGCGC CCGCCGGTGC TGGCGCTCGA TGAGCCAACT
GCGCAGCTCG ACCCGCCGGC GATGGCGGAA TTGGCAGATG TGCTGCGGGC GCTGAGCCGG
CAAGGGATGA CCATTCTGGT TGCCGAACAT CGGTTGGAAT GGGTTGCCGA CGTGGCGGAA
CGGGTGGTGG CGCTGGATCG CGGCGCCGTT CTCGCCGATG GCGCGCCTGC CGATGTGCTG
ACCGATCCGC GACTGTGCGA GCGTGGCATC GGTTGGACCC GTCCGACGAA AATAGCGGCA
CAGGCGCGCA CCGACGGACG CTGGCCACCG AATCGTCCTC TGCCGATCAC GGTTGCCGAC
CTTGTGGCGG GATTGCGCGC CATAGCCACA GGTCAGCATC CTGCGTCTGC ACAGGATGGC
GCCATCGATT CAACGGGAGT CCAGCCAACG AGTGTACAGC GGATGACACA CAGCACCGAA
CCTATCGTGA CACTCGATGA GGTGCATTTT ACGTACCCGA CCGGCGTTGA GGCGTTGCGT
GGCGCATCGC TGGCGGTGCG ACGCGGTGAG CGGATTGCGC TGGTGGGGCG AAACGGTGCG
GGAAAGAGCA CGCTGGTGCG ACATCTGAAC GGTCTGTTGC GCCCGTCGCG CGGGCGCGCC
CTGGTGAACG GCATTGACAC GCGGACAACC ACTGTAGCGC GGTGCGCTCG TCATGTCGGC
GTCGTCTTCC AGGATGTGCG CAATCAACTG TTTGCCCGCA CCGTGCGCGA CGAGATCCGT
TTTGGACCAC AAAACCTGGG ATTTGCGCCG GAAAAGGTCG AGGCATTGAC CGAGACGGCG
ATCGATGCGC TCGATCTGCG CGATGTCGTC AATGAGCATC CCTACGATCT GCCGCCTGCC
CGTCGTCGTC TTGTGGCGGT TGCCGCAGTT CTGGCGATGG ACACGGCGCT GCTGGTGCTC
GATGAACCGA CTGCCGGGCT TGACAACGCC AGCATCGATG TGCTGGCGCG GCTGATCGAC
GATCTTGCGA CACGCCAGCG GAGTGTGCTG GTCGTCAGTC ACGACCTCGA TTTCTGTTAC
GAGACGCTTG ATCGTGTTGT TCTCATGCGC GATGGGCGGA TCGCGCTCGA CAAACGTTTT
GCAGAACTCG ACCGGGCGCA GATGGAAGCG CTCGACAGTG ATGTCGGGTT GCCCATCACG
CTGCGCCTGC GTTACGTAAA CCCATAG
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| Protein sequence | MNNMGQQHTP IALHRVTFTY AGATEPALRN VTLTVPAGQI CAVIGRAGAG KSTLCALCAG
FVPHFFRGRL DGDASVDGLA IATHPIAELV RHVALVGSNA FSQISGARFT VYDEVAFGLE
NLGVPREEMI ARVEWALQAL GIDHLRDRSP YALSGGQQQR MVIAAALAMR PPVLALDEPT
AQLDPPAMAE LADVLRALSR QGMTILVAEH RLEWVADVAE RVVALDRGAV LADGAPADVL
TDPRLCERGI GWTRPTKIAA QARTDGRWPP NRPLPITVAD LVAGLRAIAT GQHPASAQDG
AIDSTGVQPT SVQRMTHSTE PIVTLDEVHF TYPTGVEALR GASLAVRRGE RIALVGRNGA
GKSTLVRHLN GLLRPSRGRA LVNGIDTRTT TVARCARHVG VVFQDVRNQL FARTVRDEIR
FGPQNLGFAP EKVEALTETA IDALDLRDVV NEHPYDLPPA RRRLVAVAAV LAMDTALLVL
DEPTAGLDNA SIDVLARLID DLATRQRSVL VVSHDLDFCY ETLDRVVLMR DGRIALDKRF
AELDRAQMEA LDSDVGLPIT LRLRYVNP
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