Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4392 |
Symbol | |
ID | 5541905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5644627 |
End bp | 5646474 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640896492 |
Product | chaperone protein DnaK |
Protein accession | YP_001434428 |
Protein GI | 156744299 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.253837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.258584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAA TCATCGGGAT CGACCTTGGC ACGACCAATT CCGTCGTCGC GGTGATGGAA GGCGGCGAAC CGGTGGTTAT TGCCAATGCC GAGGGGAGCC GCCTGACCCC TTCGGTCGTT GCGGTCAATA AGGCGGGTGA ACGTCTGGTC GGGCAGACTG CCAGACGGCA GGCGGTCGTA AACCCGGAAC ACACGATTTT CTCGGTCAAA CGCTTCATCG GGCGCAAACT GTCTGATCCG GCGGTGCAGA AGAGCCGGGC GCTGGCGCCG TATCGCCTGG TCGAGGCGCC AAACGGCGAT GCCTGGGTGC ATATGGGTGG GCGCGATTAT AGCCCGCAGG AGATTTCGGC GTTTGTGCTG CAAAAACTCA AAGCCGACGC CGAGGCGCAC CTGGGCGAAC CGGTGACGCA GGCGGTGATT ACGGTTCCTG CCTATTTCAA CGACAGTCAG CGCCAGGCGA CGCGCGATGC CGGTCGGATC GCCGGACTGG AGGTGGTGCG CATTATCAAT GAGCCGACGG CGTCGGCGCT GGCGTATGGT CTCGACCAGA ATACGCACAA TCATGTGATC GCGGTCTATG ATCTCGGCGG CGGCACGTTC GATATTTCGA TCCTCGAACT CGGCGACGGG GTCTTCGAGG TGAAAGCCAC CAACGGCGAT ACGCACCTCG GCGGTGATGA TTTCGATCAG CGCATCATCG AATGGATGGC AGCCGCGTTT CAGCAGGAGC ACGGCATCGA TCTGCGCGCG GATCGGGCCG CTCTGCAACG GATGAAGGAG GCGGCTGAGC GCGCCAAGCA GGAACTTTCA ACCGTTGTGC AGACGGAGAT CAGTCTGCCG TTCATCACTG CCGACTCCAG TGGTCCGCTC CATCTGCATA TGACGCTGAC CCGCGCCAGA CTGGAGCAAC TGACTGCCGA TCTGATCGAA CGCACCATTG GTCCGATGCG GCAGGCGCTT GCCGATGCCG GGATGCGTCC GAACGATATC GACGCTGTGG TGCTCGTCGG CGGGCAGACG CGCATGCCCG CCGTGCAGGA GATGGTGCGC CGGTTTTTCA ACCGCGAGCC GCATCGGGGC GTGAACCCGG ATGAGGTTGT GGCGATTGGC GCCGCGATTC AGGCTGGCGT GCTCGCCGGG GAGGTGGGGC ATGTGGTGCT GCTCGATGTG ACGCCGCTGA CCCTGGGCAT CGAAACGCTT GGTGGGGTGA TGACACCGCT CATCGAGCGC AATACGACGA TTCCAACCCG GAAAAGCCAG GTGTTCTCTA CCGCTTCGGA TAACCAGAGT AGCGTCGAAA TCCACGTGTT GCAGGGTGAA CGTGTCGAAG CGCGCGCCAA TAAGTCGCTC GGACGGTTCG TGCTGGACGG CATTCCGCCA GCGCCGCGCG GCGTACCTCA GATTGAGGTG ACGTTCGATA TCGATGCGAA TGGCATTTTG AACGTCTCAG CCGCCGATAT GCGCACCGGC GCAGCGCAAC GTATTACGAT TACGGCATCG TCAGGGCTGT CTGAAGATGA AATCCAGCGC ATGATCGCGG AAGCGGAACA GTACGCCGAA GAGGATCGCC GACGGCGCGA ACTGATAGCG GCGCGGAATG CGGCGGATAG CGCGATCTAC CAGGCGGAGC GCCTGCTGCG TGAGACAGGG GAAGCCATCG ACGAAGCCGT GCAGGCGCAG GTGCGCGACC GGATCGCAGC CGCGCGGCTG GCGGCCGAGG GCGATGATAC GAATGAGATT CGGAATCGGA TAGCGGAACT CACGGTTGCG GTGCAGCAGG CGGTGCGGAC AACCAACACG CGCAGCGCCG CCGGCGGGGA CGCGGATCGC GAAAACGATA TGCGTTGA
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Protein sequence | MSKIIGIDLG TTNSVVAVME GGEPVVIANA EGSRLTPSVV AVNKAGERLV GQTARRQAVV NPEHTIFSVK RFIGRKLSDP AVQKSRALAP YRLVEAPNGD AWVHMGGRDY SPQEISAFVL QKLKADAEAH LGEPVTQAVI TVPAYFNDSQ RQATRDAGRI AGLEVVRIIN EPTASALAYG LDQNTHNHVI AVYDLGGGTF DISILELGDG VFEVKATNGD THLGGDDFDQ RIIEWMAAAF QQEHGIDLRA DRAALQRMKE AAERAKQELS TVVQTEISLP FITADSSGPL HLHMTLTRAR LEQLTADLIE RTIGPMRQAL ADAGMRPNDI DAVVLVGGQT RMPAVQEMVR RFFNREPHRG VNPDEVVAIG AAIQAGVLAG EVGHVVLLDV TPLTLGIETL GGVMTPLIER NTTIPTRKSQ VFSTASDNQS SVEIHVLQGE RVEARANKSL GRFVLDGIPP APRGVPQIEV TFDIDANGIL NVSAADMRTG AAQRITITAS SGLSEDEIQR MIAEAEQYAE EDRRRRELIA ARNAADSAIY QAERLLRETG EAIDEAVQAQ VRDRIAAARL AAEGDDTNEI RNRIAELTVA VQQAVRTTNT RSAAGGDADR ENDMR
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