Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4360 |
Symbol | |
ID | 5541873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5615486 |
End bp | 5616472 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640896466 |
Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
Protein accession | YP_001434402 |
Protein GI | 156744273 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCAA CCACCGGTCA CATTCCTGGC GCACAATGGT CGCTCTTCGG AGCGGAACTG CACATTCCGG ACGGTTTCCT CAACCTGCCG ATCTCGATTG TCTGCTGGAT CGGCGCGATT GCGCTCATTG CATTTGCCAC CCAACGCGCG CAACGCACGC TCGATGAGCG CCAGATGCCG CTGATGGGCA TCATGGCAGC GTTCATTTTT GCGGCGCAGA TGATCAACTT CCCGGTCGCC GGCGGAACGT CGGGGCACCT GCTCGGCGGT GTGCTGGCAG CGGTCACGCT CGGTCCGTGG GCGGGGATTC TGGTGATGAC CGCCGTAATC GCCGTGCAGG CGCTGCTCTT CCAGGATGGT GGGCTGCTGG TAATGGGGGC GAACATTTTG AACATGGGGT TAATCACGGC GTTGATCGGC TATGGACTGT ATCGCAGCGT TATTCATCAG CGTCCGGCGA TTCGCCTGGC AGTCATTGGC GTGGCAGCCT GGCTTTCGGT GATGGGCGCT GCGCTGGCGA CATCGCTGCA ACTCTGGTTG AGCGGCACAG TTCCGCTCGA GGTGGTAATC CCGGCGATGA TGAGCGTGCA TGCACTGATC GGCATCGGCG AGGCGCTGAT CACGGTCGTG GCAGTGTCAT TCATTCTCCG CACACGCCCG GAACGTATGG CAACCGATGC GCAGCGCAGC GGCGCTGACC GCGGCTGGAT CATTGGCGGC GCACTTGCCG CGCTCATCGT GGTCGTGTTG TCGCCGCTCG CCTCCGCCAA CCCGGACGGT CTCGAGCGCG TGGCGGAGGA TATGGGCTTT ATCGATCTGG GGCAAAGCGC ACCGTATGAG ATTATTCCCG ACTATACCGT ACCCTTCCTT GGCGAAACGC CGCTCTCGAC AATTGTAGCA GGCATTATCG GGGCGCTGGT CGTCACTGTG GTCGTCGTCC TTATCGCACA GGCAGTGCGA AGCCGGCAGG CAGGGATCAG GAGTTAG
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Protein sequence | MGATTGHIPG AQWSLFGAEL HIPDGFLNLP ISIVCWIGAI ALIAFATQRA QRTLDERQMP LMGIMAAFIF AAQMINFPVA GGTSGHLLGG VLAAVTLGPW AGILVMTAVI AVQALLFQDG GLLVMGANIL NMGLITALIG YGLYRSVIHQ RPAIRLAVIG VAAWLSVMGA ALATSLQLWL SGTVPLEVVI PAMMSVHALI GIGEALITVV AVSFILRTRP ERMATDAQRS GADRGWIIGG ALAALIVVVL SPLASANPDG LERVAEDMGF IDLGQSAPYE IIPDYTVPFL GETPLSTIVA GIIGALVVTV VVVLIAQAVR SRQAGIRS
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