Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4321 |
Symbol | |
ID | 5541832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5570933 |
End bp | 5571517 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640896425 |
Product | NusG antitermination factor |
Protein accession | YP_001434363 |
Protein GI | 156744234 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0895327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGAAG AGAAAAAAGA ACAGGAAATC CAGCCCGAGT CGGAGATACG CGATGATGAT CGTCGCTGGT ATGTGATTCA TACCTACTCC GGCTATGAGA ACAAAGTGAA GCAAAACCTG CTCCATCGCA TTGAGACGAT GGAAATGCGT GATCAGATTT TCAACGTCAT CGTGCCGACG GAAGAGGAAA TTGAAATCAA AAATGGTCAG CGCCGCACAG TTCAGAAAAA GGTGTTTCCT GGATATGTGC TGGTGCAGAT GAAAATGAAC GACAACTCCT GGTATGTCGT TCGCAATACG CCGGGTGTGA CGAGTTTCGT CGGGCATGGG AATAAGCCGA CGCCGCTTGA AGAAGAAGAG GTGAAGGCGA TCCTGAAGCA GATGGAACAG GAAGCGCCTA AGGTGAAGGT GAGTTATCAG GTTGGTCAGG CGGTCAAGAT TACGGATGGT CCGTTCACCG ACTTCGAGGG GATCGTGGAC GCAATTGACC ACGAGCGTGG TCGTGTGCGG GTGCTGGTCT CGTTCTTCGG TCGTGAGGCG CCGGTCGAAC TGGACTTCCT TCAGGTGACG CGCCTGGTCG AATAG
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Protein sequence | MTEEKKEQEI QPESEIRDDD RRWYVIHTYS GYENKVKQNL LHRIETMEMR DQIFNVIVPT EEEIEIKNGQ RRTVQKKVFP GYVLVQMKMN DNSWYVVRNT PGVTSFVGHG NKPTPLEEEE VKAILKQMEQ EAPKVKVSYQ VGQAVKITDG PFTDFEGIVD AIDHERGRVR VLVSFFGREA PVELDFLQVT RLVE
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