| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4313 |
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| Symbol | |
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| ID | 5541824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5563964 |
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| End bp | 5565187 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640896418 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001434356 |
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| Protein GI | 156744227 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.458904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTTCAT TCGCCGCCCG CGCCCGCGCG ACGATGGCGC GGATTTCACC GCAGGTCTGG
CGCGTTCTGG CGCACAGTCT GCTCTTCGGG CTGGCTGGCA GCATCGCCGA TCTGCTCTTC
AACTTCTACC TGGTGAGCCT GGGGTATGGC GCCGACACCG CCGGCCTGAT GGCGACGGTG
TATCGCGGCG CGGGGGCGTT GCTTGGTCTG CCGCTTGGCG TTCTGATTGA CCGGTTTGGC
GCGCGAATGC TGCTTGTGGC AGGGGCTATT GGCTTTGGGG TCGCCTATGC GCTGCTGTTG
ATGGTATCGC AACTGTGGGC GCTCATTCTT TTTGTCTTTC TGGCAGGCGC GGCGAATGTG
CTGGCGCTGA CGGCGGTCGT GCCGCTGTTG ACCGGCATCA CCAGCGCTGA GGAACGGGCG
ACGGTGTTCG GCATGAATGC ATCGGCAGGG CTGATCATCG GTCTGGTCGG CAGTAGCGTC
GGTGGATTGC TGCCTGGAGC AGCGGCGCTG TTCCTGGATG TTGATGCGCG CGACACCGAC
GCCTATCGTC TGGCGCTATC GGTCGTTGTT GTGCTGGGAT TCGTCTCGGT GGCGCCGGTA
CTGGTCGGGT TTCGCGCTCG TCCTGTTGCG ACTGAGACAG CCGCGACGGT TGCCGTAGAA
CCACAGCGAC CTGCGAGTCC GCTCCGTTTG TTGCGTTTTG CGCTTCCTTC GCTCTTGCTG
GGGATTGGCG GCGGTCTGTT CCTGCCGTTC CAGAACCTTT TCTTCCGCAC CGTTTTCGGA
CTGAACGACG CGGTCGTCGG GGTGATGCTG GCGATGGGGG CGCTTGGCAT GGGGCTTGGG
GCGCTCCTGG GCGCGCCGGT CGCAGCGCGG ATGGGATTGC GGCGCGCTGC CGGCACGCTC
CGGTTTGGCG CCGTTTTCGC CGTTGCGCTC ATGTTCGCGC CCGCGTTGCC GGTTGTTGTG
GTGGGGTACA TGCTGCGCGG CGCGTTCATT GCCGCCAGTT ACCCGCTGAA TGACGCGCTG
GTGATGCAGT TGACGCCGGC GCGACAGCGT GGGGTTGCTA TCAGTCTGTT GAGCGTTCTC
TGGTCGCTTG GTTGGTCGGC GTCGGCGTGG GTCAGCGGAC AGATTCAGGT GACCTACGGC
TTCACGCCAG CGCTGGCAGC GTCACTCGTG GCGTATGCGC TGTCGGCATG GGCGATCTGG
ACGATACGAG AGGACGAGCG TTAA
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| Protein sequence | MFSFAARARA TMARISPQVW RVLAHSLLFG LAGSIADLLF NFYLVSLGYG ADTAGLMATV
YRGAGALLGL PLGVLIDRFG ARMLLVAGAI GFGVAYALLL MVSQLWALIL FVFLAGAANV
LALTAVVPLL TGITSAEERA TVFGMNASAG LIIGLVGSSV GGLLPGAAAL FLDVDARDTD
AYRLALSVVV VLGFVSVAPV LVGFRARPVA TETAATVAVE PQRPASPLRL LRFALPSLLL
GIGGGLFLPF QNLFFRTVFG LNDAVVGVML AMGALGMGLG ALLGAPVAAR MGLRRAAGTL
RFGAVFAVAL MFAPALPVVV VGYMLRGAFI AASYPLNDAL VMQLTPARQR GVAISLLSVL
WSLGWSASAW VSGQIQVTYG FTPALAASLV AYALSAWAIW TIREDER
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