| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4310 |
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| Symbol | miaA |
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| ID | 5541821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5562089 |
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| End bp | 5563009 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640896416 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001434354 |
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| Protein GI | 156744225 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCCGC TGCTCGCCAT CGTTGGTCCG ACTGCTGTCG GCAAGACGGC GCTGAGTCTG
CACCTGGCGC GGTTGTTCGA CGGTGAGATT GTCTCTGCCG ACTCGCGCCA GGTCTACCGC
TGGATGGACA TTGGCACTGC CAAGCCAACA CCGGCCGAGC GCGCTACCGT GCCCCATCAC
CTGATCGATG TCGTCGATCC CGATGAAGAT TTTTCGCTGG CGCTGTATCA GGACATGGCA
ACCGCAGCAA TTGCCGATAT TGCAGCACGT GGGAAGTTGC CGCTGCTGGT CGGAGGAACC
GGTCAATATC TGGCGGCGGT GTTGCAGGGA TGGCAGTTGC CGCGAGTCGC CCCACGCCCC
GACATTCGCG CCGCGCTCGA ACGGCAGGCA TCGGAACAGG GAGGAGAGGC GCTCTATGCG
CGTCTCAAGG AGGTCGATCC GATTGCGGCT GCTCGTATTC TTCCGGGCAA TGTGCGCCGC
ATTATTCGCG CGCTCGAAGT CTATGAGGCG ACCGGCATAC CGATCTCCGA GCAGCGTTCG
GTGCAACCGC CACCCTACCG TATCACGACC ATCTGGCTGA CTCTGCCGGC GCCGGTGTTG
TACGCCCGCA TCGACGCGCG CGTTGAGGCG ATGATGGCTG CCGGATTGCT CGACGAAGTG
CGCGGATTGT TGGAGCGCGG CTATCACTGG AATCTACCCT CGATGTCGGG GCTCGGGTAC
CGCGAATTTC GTCCGTACTT CGAGGGGCGC GCCACGCTCG AAGAGGCAGT GACCCGCCTC
AAGTACGACA CGCATACCTT CGCGCGTCGC CAACCCGCCT GGTTCCGCCG CCTGCCCAAC
ATCGTCACCC TGCCCGCCGA TGCGCCCGAC CTGCTGCAAC GCGCGGAAGC GATTGTGCGG
CAAACATTCG ATTCATCGTA G
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| Protein sequence | MIPLLAIVGP TAVGKTALSL HLARLFDGEI VSADSRQVYR WMDIGTAKPT PAERATVPHH
LIDVVDPDED FSLALYQDMA TAAIADIAAR GKLPLLVGGT GQYLAAVLQG WQLPRVAPRP
DIRAALERQA SEQGGEALYA RLKEVDPIAA ARILPGNVRR IIRALEVYEA TGIPISEQRS
VQPPPYRITT IWLTLPAPVL YARIDARVEA MMAAGLLDEV RGLLERGYHW NLPSMSGLGY
REFRPYFEGR ATLEEAVTRL KYDTHTFARR QPAWFRRLPN IVTLPADAPD LLQRAEAIVR
QTFDSS
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