| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4306 |
|---|
| Symbol | |
|---|
| ID | 5541817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 5555888 |
|---|
| End bp | 5556760 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640896412 |
|---|
| Product | prolipoprotein diacylglyceryl transferase |
|---|
| Protein accession | YP_001434350 |
|---|
| Protein GI | 156744221 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0682] Prolipoprotein diacylglyceryltransferase |
|---|
| TIGRFAM ID | [TIGR00544] prolipoprotein diacylglyceryl transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCCAC CAGTTGATCC AGTCATTATT TCGCTTGGTC CGCTCACGCT GCGCTGGTAC
GGCGTCCTGA TCATGACCGG CGTCATGCTG GCGGCGTGGG TTGGGGCACA GCACGTCGAG
CGGCGCGGGT TCGACCGGGA TTCGGTGTGG GATCTGCTCT TCTGGGTGCT CATTCCTGGC
TTGCTCGGCG CCCGGCTCTA TTATGTCTTC ATTCAGTCGC CACGCGGACC GGAAGGTCTC
GGACGTTTTC TTGCCCATCC GGCCAGCATT CTGGCGGTGT GGGAAGGCGG ATTGCACATT
TTTGGCGGGT TTATCTTCGG CACACTGGGC TTGTGGGCAT TTGCGCGCGT GCGGAAGACG
CCGCTCCTGG TGTATGCCGA CGCTATTGCG CTTGGTCTGC CGCTGGGTCA GGCGGTTGGG
CGTTGGGCGA ATTTTATCAA CCAGGAGTTG TATGGTCCGC CGACAACCCT GCCGTGGGGG
TTGCGCATCG ATGCCGATCA TCGTATCGGT CCGTACCGCG ATCTGGCGGC TTTTCCCGAA
ACGACGCTCT TCCATCCGCT GTTTCTGTAT GAATCGCTCT GGAACCTGAT CGGTTTTGCG
TTGATCTTCT CGATATGGCG GCGCTACGGC GACCGCCTGC GTGATGGCGA CGTGCTGTTG
ATGTACCTGG TCTGGTACCC GCTGGGGCGC TTCTTTATCG AATTTCTACG CACCGACTCG
TGGTTTTTTC CTGGAACACC GTTCAACGTC GTACACATTC TCTCATTCGT CGCCGTCGTC
GGCGCGGCTA CGCTGCTCTA TCGGAGACAC GGCGGGAGGC GAGCAGCGCA CGGCGCGCGG
CGCGAGGTGG AGGGCGCGGG GAAGCCGGGT TGA
|
|---|
| Protein sequence | MYPPVDPVII SLGPLTLRWY GVLIMTGVML AAWVGAQHVE RRGFDRDSVW DLLFWVLIPG
LLGARLYYVF IQSPRGPEGL GRFLAHPASI LAVWEGGLHI FGGFIFGTLG LWAFARVRKT
PLLVYADAIA LGLPLGQAVG RWANFINQEL YGPPTTLPWG LRIDADHRIG PYRDLAAFPE
TTLFHPLFLY ESLWNLIGFA LIFSIWRRYG DRLRDGDVLL MYLVWYPLGR FFIEFLRTDS
WFFPGTPFNV VHILSFVAVV GAATLLYRRH GGRRAAHGAR REVEGAGKPG
|
|---|
| |