| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4287 |
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| Symbol | |
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| ID | 5541798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5528871 |
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| End bp | 5530622 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640896394 |
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| Product | fibronectin-binding A domain-containing protein |
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| Protein accession | YP_001434332 |
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| Protein GI | 156744203 |
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| COG category | [K] Transcription |
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| COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0863996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTTCG ATGCCCTGAC TCTTGCCGCT GTCGTCGATG AATTGCGCGC AACCATTGTT
GGCGGTCGCG TCCAGCGTGT GTTGCTGCCC GGTGCGCTGA GCGTCGCGCT TGAAATCTAT
ACCGGTCGCC GCTGCTACCT GCTTCTCTCC GCCCATCCGC AGTTTGCGCG CGTCCAGTTG
AGCCCGGTGC GCATCTCACG CGGCACGGAT GCGACGCCGC CATTGTTGCT GTTGTTGCGC
AAGTATGTCA ATCGCGGGCG GATCACTGCC GTTGAACAGC CCGATCTGGA GCGGGTGTTG
CTGCTAAGTA TAGCCAAACG TCCCTTCTCG CGCAACTCCG ATCACCCAGC GGATCTCGAC
GATGATGACA CGCCGCCGGA GGACACCGCG CCGGAGGAGG AAACGCTGCG TTGTGAGTTG
ATTGTCGAAA TCATGGAACA GCGCAGTAAT ATTGTGCTGG TTGGCGACGA CAATATCATT
CTGGCGGCAG CGCGGCATGT GACGCCGCGC ATGAGCCGCC GACCTGTGCT GCCGCGTGAA
CCATACGAAC TCCCGCCGCC GCAGATCAAA TACGACCCAC GGCAGGCGAC GGCGGCTGAA
CTGCGCGCCG CCATCCCGGA TGGGCAACCT GATCTGGCGC GTGCTCTGGT GAGCGCCTAT
CGCGGTTTGT CGCCGCTGGC GGCGCGCGAA GCGGTGTATC GGGTGATGGG ACGCACCCTT
GTGCCTACCG GTCCCGATCT GCCATGGGAC GCGCTCGCCG ACGCGCTGTG CGCGTTGTGG
CACGCTTCCT GGTCGCCGCA TCTGGTGGTC GATGAGCGTG GCCCGATCGC GTTTGCGCCA
TATGAAATCA CACATCTGGC AGGGGCGCGC CCCTACGCCT CGATGAGCGC CGCACTCGAT
GCATACTACG CGGCGCGTGA GCGCCTGACG GCGCACCAGC AACGCCGCGA CGCGCTGCGC
GAGCAGTTGC ATGATACGCG CGAGCGCCTG GAACGGCAGC GATCCGCTTT GCACGCCGAG
TTGCAGCGTG CAGCCGACTT CGAGCGATTG CGCTGGGAGG GAGAAATGAT CTTCGCCTTC
CTCCATACGC TGACGCCGGG GCAGGAGCAT CTTGACGTCG AAGGACGCAC CATTACGCTC
GACCCCCATA AGTCGCCGGT CGAGTCCGCT CAGGAGCGAT TTCGCGCCTA TGACAAAGCC
AAAAGCGCGC TTACGGGAGT CCCCGAACGA TTGCGCGCCG TCGAGTTGCG TCTGGCAGGT
CTTGACGAAA CGCTGGCGCT GCTGGACGTA GCGGAGCGGT TCGAGGAGAT TGAGGCGATT
GCGCGTGAAG CGGAAGCAGA AGGGTATCTT GGACCCGCAT CCACAGAACG CACCCGGAAG
CGCCAGGCGC GTCCTATGCC TCCCCTGCGT CTTGAGTCGA GTGACGGATT CACGATCTAT
ATCGGGCGAA CCGCGCAGCA GAACGAGCAG GTCACCTTCC GTCTCGGCGC GCCCGATGAT
CTCTGGCTGC ACGCGCGCGG CGCGCCTGGC GCCCACGTCA TTATCAAAAG CGGCGGACGG
GAGGTTCCAG AACGCACAAT TGAGGAAGCA GCGGCGCTGG CGGCATACTA CAGCGCTCTG
CGTTCATCCT CGAGCGTTGA TGTCGAGATT GCGCGACGCC GCCACGTGCG CAAGGTGCGT
GGCGGACCGG CAGGTCTGGT GACGTACCGG GCGGAGCGGA GCGTGCGGGT GGCGCCGCGA
CCGCCATGGT AG
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| Protein sequence | MYFDALTLAA VVDELRATIV GGRVQRVLLP GALSVALEIY TGRRCYLLLS AHPQFARVQL
SPVRISRGTD ATPPLLLLLR KYVNRGRITA VEQPDLERVL LLSIAKRPFS RNSDHPADLD
DDDTPPEDTA PEEETLRCEL IVEIMEQRSN IVLVGDDNII LAAARHVTPR MSRRPVLPRE
PYELPPPQIK YDPRQATAAE LRAAIPDGQP DLARALVSAY RGLSPLAARE AVYRVMGRTL
VPTGPDLPWD ALADALCALW HASWSPHLVV DERGPIAFAP YEITHLAGAR PYASMSAALD
AYYAARERLT AHQQRRDALR EQLHDTRERL ERQRSALHAE LQRAADFERL RWEGEMIFAF
LHTLTPGQEH LDVEGRTITL DPHKSPVESA QERFRAYDKA KSALTGVPER LRAVELRLAG
LDETLALLDV AERFEEIEAI AREAEAEGYL GPASTERTRK RQARPMPPLR LESSDGFTIY
IGRTAQQNEQ VTFRLGAPDD LWLHARGAPG AHVIIKSGGR EVPERTIEEA AALAAYYSAL
RSSSSVDVEI ARRRHVRKVR GGPAGLVTYR AERSVRVAPR PPW
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