Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4267 |
Symbol | |
ID | 5541778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5508468 |
End bp | 5509421 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640896374 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001434312 |
Protein GI | 156744183 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.307285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.160905 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTAC TGATCACCGG CGGCGCCGGC TTTCTTGGTT CTCATTTGTG TGATCGATTC CTGGCGGAAG GTCATACCGT CGTGGCGATG GACAATCTGA TTACCGGCAA CACCGACAAT ATTGCCCATC TTGCCGGTCA TCCGCGCTTC AGTTTCATCA AGCACGACGT GACGAACTAT ATTTTTGTCG AGGGTCCGCT CGATGCCATT TTGCACTTCG CCTCACCCGC CTCACCGGTC GATTATCTGG AGTTGCCGAT TCAAACGCTG AAAGTCGGCG CACTCGGCAC GCACAAGGCA TTGGGGCTGG CAAAGGATAA AAAAGCGCGC TTCCTGCTCG CTTCGACTTC AGAAGTGTAC GGCGATCCAC AGGTGCATCC GCAACCTGAA ACATACTACG GACACGTCAA TCCCATTGGT CCACGTGGTG TGTACGATGA AGCCAAGCGC TTCGCCGAGG CGATGACCAT GGCGTACCAT CGCTATCACG GCGTCGAGAC GCGCATTGTA CGCATTTTCA ACACCTATGG TCCGCGCATG CGTCTCCGCG ATGGTCGGGT GGTGCCCAAT TTCATTCAGC AAGCATTGCG CGGCGAGCCG CTGACCATTT ATGGAGATGG CTCGCAAACG CGATCATTTC AATATGTCGA TGATCTGGTG GAAGGGGTCT ATCGCCTGCT CTTTTCCAAC GAAGTCGAGC CGGTCAATAT TGGCAATCCC GGCGAGTTTA CCATTAAAGC GTTCGCCGAA CTGGTCAATG CGTTGACCGA CAACAAGGCT GGTGTGGTGT ACAAAGATCT GCGCACACAG GACGATCCGC AGGTGCGTCA GCCGGACATT GCGAAGGCGC GCAGGATTCT GGGGTGGGAG CCGCGCGTCA GCCTCGAAGA AGGGTTGCGT CGCACCATTC CATGGTTTCG TGAAGAACTG CGGAAACGCG GAGAACTGCC GTGA
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Protein sequence | MRVLITGGAG FLGSHLCDRF LAEGHTVVAM DNLITGNTDN IAHLAGHPRF SFIKHDVTNY IFVEGPLDAI LHFASPASPV DYLELPIQTL KVGALGTHKA LGLAKDKKAR FLLASTSEVY GDPQVHPQPE TYYGHVNPIG PRGVYDEAKR FAEAMTMAYH RYHGVETRIV RIFNTYGPRM RLRDGRVVPN FIQQALRGEP LTIYGDGSQT RSFQYVDDLV EGVYRLLFSN EVEPVNIGNP GEFTIKAFAE LVNALTDNKA GVVYKDLRTQ DDPQVRQPDI AKARRILGWE PRVSLEEGLR RTIPWFREEL RKRGELP
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