Gene Rcas_4221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4221 
Symbol 
ID5541732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5461271 
End bp5461570 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content63% 
IMG OID640896328 
Producthypothetical protein 
Protein accessionYP_001434266 
Protein GI156744137 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.306362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTG CAGCCAAACG AGGAGCGATT GCCGGTCTGG TCGTCGGCAT TCTGATACTT 
GGCGGTGTCC TGGCGATAGC CGCCCAATGT CTCCCGTTGC GCATCGCCCC GCCTGCCGCA
CCCGGACCCT GGTATTGCGT CGATCCGGCC TACAGCGCCA TCGGCTATCT GGCGTTTCCG
GTGAATCTCC TCACCAACGA CCTGGCGACC GCCATTCCGC TTGCTCCGCT CTCCCTGATC
ACGTATGCGC TGATCGGCAT GGCGATTGGT GCGATGGCAG GAAAGGCGCG GTCAACGTAG
 
Protein sequence
MSSAAKRGAI AGLVVGILIL GGVLAIAAQC LPLRIAPPAA PGPWYCVDPA YSAIGYLAFP 
VNLLTNDLAT AIPLAPLSLI TYALIGMAIG AMAGKARST