| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4219 |
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| Symbol | |
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| ID | 5541730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5458140 |
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| End bp | 5459615 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640896326 |
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| Product | O-succinylbenzoate-CoA ligase |
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| Protein accession | YP_001434264 |
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| Protein GI | 156744135 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.121755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCG ATTGGCTCTC GGCGCAGGCG CAGGCGCGTC CCGAAGGTGC GGCGCTGATC
ATCGGCGACA CAACACTGAC GTACCGCGCT CTGCACGAGC AAACGGCGAC GTTCGCTTCC
CGCCTCGCTG CGGCTGGCGT CGAGCAAGGC GCGGTTGTCG GCGTGCTGTT GTCGAATCGT
CTCGAAGCGG CGCTGGCGGT GCATGCCGCG CCGCGCCTCG GCGTGACGCT GGCGCTGTTC
AACACCCGCC TGACCCCTGC CGAACTCGAT GCGCAGGTGC GCGCAGCAGT GTGTCGCATC
CTCGTGTGTG AGCGCGACAC GCTGTTGGCA GCGCTGGCGC TTCCTTCGGC GCCCCATGTG
CTGTGCGTCG ATCCGGTCGA CGACCCACGC CTGACGCCGG TTGACCGGAT TTCCGGGGAT
AGCGCCGCAT ACTGCGAAGG CGCCATCGAC CTCGATGCGC CGTTTGTGAT GATGTTCACT
TCGGGGACAA CGGGGACGCC ACGGGGAGTA GTGCTGACCT ACGGCGCATT CTTCGCCAGC
GCGATGGCGT CGGCATACCG CATCGGCGTT CTGCCGGGCG ACCGCTGGCT CTGTGTGTTG
CCACTCTATC ACATTGGCGG TCTCAGCATT CTGCTGCGGT CCTGCCTCTA CGGCACGGCA
GTGGATCTCT GGCAACGTTT CGACGCTCCG GCAATCACAG AACGTTTGAA GGCGACACCG
ATCACACTCA TTTCGCTGGT GCCGACGATG CTCTACCGCC TGCTCGATGA CGCTGGCGAT
GCGCCACCGA ACCTGCGGCT CGTGCTGCTT GGCGGAGCTG CTGCGCCAAC CGATCTGCTG
GAGCGCGCAC TGGAAGCAGG ATGGCCCATT GCCACAACCT ACGGGCTGAC CGAGGCAGCG
TCGCAGGTGG CGACGGCGCT GCCCGACGAG GTACGGCGCA AGCCCGGCAG CGTCGGGCGA
CCGCTGATCT TCACCCACGT GCGTGTGACG AACGAACAGG GACGCGACCA ACCACCCGGC
GTCTACGGCA ACATCCTGGT GCGGGGTCCG ACCCTGATGC GCGGATACCT CGGCGAAACG
CCGCTCGACG CCGACGCCTG GTTTGCCACC GGAGACATCG GCTATCTCGA CGCCGACGGC
GACTTGTGGG TAGTGCAGCG ACGCAGCGAC CTGATTATCA GCGGCGGGGA GAATATCTAT
CCGGCGGAAG TCGAACAGGC GCTGCGCCAG CACCCCGCAG TCGCCGATGT TGCAGTCGTT
GGCGTGCCAT CAGCGGAGTG GGGGCAGCAG GTCGGCGCTG CCATCGTCCT GCGCGACCCA
TCGGTGAGCG TCGAAGCAAT CCTGGCGTTC AGCCGCACTC GTCTGGCGGG ATACAAACAA
CCGCGCGTCG TTCGCATCGT CGCTGAGTTG CCGCGCACCG CATCGGGAAA GATTCAGCGG
GAAGCGGTGA TCAATCTGTT GAAGGTTGCA GGTTAA
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| Protein sequence | MMRDWLSAQA QARPEGAALI IGDTTLTYRA LHEQTATFAS RLAAAGVEQG AVVGVLLSNR
LEAALAVHAA PRLGVTLALF NTRLTPAELD AQVRAAVCRI LVCERDTLLA ALALPSAPHV
LCVDPVDDPR LTPVDRISGD SAAYCEGAID LDAPFVMMFT SGTTGTPRGV VLTYGAFFAS
AMASAYRIGV LPGDRWLCVL PLYHIGGLSI LLRSCLYGTA VDLWQRFDAP AITERLKATP
ITLISLVPTM LYRLLDDAGD APPNLRLVLL GGAAAPTDLL ERALEAGWPI ATTYGLTEAA
SQVATALPDE VRRKPGSVGR PLIFTHVRVT NEQGRDQPPG VYGNILVRGP TLMRGYLGET
PLDADAWFAT GDIGYLDADG DLWVVQRRSD LIISGGENIY PAEVEQALRQ HPAVADVAVV
GVPSAEWGQQ VGAAIVLRDP SVSVEAILAF SRTRLAGYKQ PRVVRIVAEL PRTASGKIQR
EAVINLLKVA G
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